RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OTUD6BQ8N6M0 293 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 PPM1NQ8N819 430 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 C2CD4AQ8NCU7 369 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-207ENST00000597136 GABPB2Q8TAK5 448 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-207ENST00000597136 GDAP1Q8TB36 358 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 RTKNQ9BST9 563 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 FETUBQ9UGM5 382 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 FBXO5Q9UKT4 447 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 GPSM3Q9Y4H4 160 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 PSAT1Q9Y617 370 aa14.79□□□□□ -0.04
TRIM28-207ENST00000597136 TRBV5-4A0A0C4DH59 114 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 POC1B-GALNT4F8VUJ3 575 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 MAP2K7O14733 419 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 SIGLEC6O43699 453 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 NUAK1O60285 661 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 IVLP07476 585 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 GCAP28676 217 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 SLC1A2P43004 574 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 GRK6P43250 576 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 BLKP51451 505 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 CTBSQ01459 385 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 CTBP1Q13363 440 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 ITGA9Q13797 1035 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 SEMA3AQ14563 771 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 PSAPL1Q6NUJ1 521 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 LRIG3Q6UXM1 1119 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 TAS2R42Q7RTR8 314 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 SDCCAG8Q86SQ7 713 aaPredicted RBP14.78□□□□□ -0.04
TRIM28-207ENST00000597136 LDB1Q86U70 411 aaPredicted RBP14.78□□□□□ -0.04
TRIM28-207ENST00000597136 SLC26A11Q86WA9 606 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 PHYKPLQ8IUZ5 450 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 BAHD1Q8TBE0 780 aaPredicted RBP14.78□□□□□ -0.04
TRIM28-207ENST00000597136 SLC44A1Q8WWI5 657 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 MRRFQ96E11 262 aaKnown RBP14.78□□□□□ -0.04
TRIM28-207ENST00000597136 PAFAH2Q99487 392 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 TMEM109Q9BVC6 243 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 VIPAS39Q9H9C1 493 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 NSMCE4AQ9NXX6 385 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 AKAP13Q12802 2813 aa14.78□□□□□ -0.04
TRIM28-207ENST00000597136 SPAARA0A1B0GVQ0 90 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 LMO7DNF2Z398 122 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 SASH3O75995 380 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 KCNK5O95279 499 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 S1PR4O95977 384 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 F7P08709 466 aaPredicted RBP14.77□□□□□ -0.04
TRIM28-207ENST00000597136 OGNP20774 298 aaKnown RBP14.77□□□□□ -0.04
TRIM28-207ENST00000597136 MSH2P43246 934 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 ID4P47928 161 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 B4GALNT1Q00973 533 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 ZNF844Q08AG5 666 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 TYSND1Q2T9J0 566 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 AARS2Q5JTZ9 985 aaKnown RBP14.77□□□□□ -0.04
TRIM28-207ENST00000597136 KIAA0408Q6ZU52 694 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 CHST15Q7LFX5 561 aaPredicted RBP14.77□□□□□ -0.04
TRIM28-207ENST00000597136 GALNT7Q86SF2 657 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 ZNF547Q8IVP9 402 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 RASGEF1AQ8N9B8 481 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 OR4C6Q8NH72 309 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 GPBAR1Q8TDU6 330 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.77□□□□□ -0.04
TRIM28-207ENST00000597136 TCF12Q99081 682 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 CPNE1Q99829 537 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 DHRS4Q9BTZ2 278 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 ROPN1BQ9BZX4 212 aaPredicted RBP14.77□□□□□ -0.04
TRIM28-207ENST00000597136 PPCSQ9HAB8 311 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 ROPN1Q9HAT0 212 aaPredicted RBP14.77□□□□□ -0.04
TRIM28-207ENST00000597136 SLC23A2Q9UGH3 650 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 SLC24A2Q9UI40 661 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 CSNK1G3Q9Y6M4 447 aa14.77□□□□□ -0.04
TRIM28-207ENST00000597136 COL27A1Q8IZC6 1860 aaPredicted RBP14.77□□□□□ -0.05
TRIM28-207ENST00000597136 NEMP2A6NFY4 417 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 RASGRF2O14827 1237 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 CHUKO15111 745 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 SNRNP200O75643 2136 aaKnown RBP14.77□□□□□ -0.05
TRIM28-207ENST00000597136 FAM155BO75949 473 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 CDK14O94921 469 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 AHSGP02765 367 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 CSRP1P21291 193 aaKnown RBP14.77□□□□□ -0.05
TRIM28-207ENST00000597136 SDHBP21912 280 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 GABRB3P28472 473 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 PMLP29590 882 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 TTPAP49638 278 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 CTSCP53634 463 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 MPP1Q00013 466 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 ZNF789Q5FWF6 425 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 CRTC3Q6UUV7 619 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 CERS6Q6ZMG9 384 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 STRA8Q7Z7C7 330 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 TAF8Q7Z7C8 310 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 SERPINA9Q86WD7 417 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 NXPE1Q8N323 547 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 DDHD1Q8NEL9 900 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 EPS8L3Q8TE67 593 aaKnown RBP14.77□□□□□ -0.05
TRIM28-207ENST00000597136 DCAKDQ8WVC6 231 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 SCG3Q8WXD2 468 aaKnown RBP14.77□□□□□ -0.05
TRIM28-207ENST00000597136 ULK4Q96C45 1275 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 SGF29Q96ES7 293 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 MCMBPQ9BTE3 642 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 BOCQ9BWV1 1114 aa14.77□□□□□ -0.05
TRIM28-207ENST00000597136 SPATS2LQ9NUQ6 558 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms