RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OGFOD3Q6PK18 319 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 TRABD2AQ86V40 505 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 ANKMY2Q8IV38 441 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 KLHDC8BQ8IXV7 354 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 AGGF1Q8N302 714 aaeCLIP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 FAM46DQ8NEK8 389 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 KIAA1143Q96AT1 154 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 VAT1Q99536 393 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 DDA1Q9BW61 102 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 C1QTNF7Q9BXJ2 289 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 ZDHHC6Q9H6R6 413 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 PSMC3IPQ9P2W1 217 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 HS3ST4Q9Y661 456 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 MED13LQ71F56 2210 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 IGHV5-10-1A0A0J9YXX1 117 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 ERICH4A6NGS2 130 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 WASH4PA8MWX3 477 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 B4GAT1O43505 415 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 MMP20O60882 483 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 PAGE1O75459 146 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 FAM107AO95990 144 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 HTR1BP28222 390 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 SSTR1P30872 391 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 STX2P32856 288 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 ACBD5Q5T8D3 534 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 ATP1A1-AS1Q5TC04 95 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 TTC19Q6DKK2 380 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 TCTN3Q6NUS6 607 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 ASB18Q6ZVZ8 466 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CYS1Q717R9 158 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 IGDCC3Q8IVU1 814 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 TAB3Q8N5C8 712 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 LZTR1Q8N653 840 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 PCDH20Q8N6Y1 951 aaKnown RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 NPWQ8N729 165 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 TP53I13Q8NBR0 393 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 BCAS4Q8TDM0 211 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 FBF1Q8TES7 1133 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 MZB1Q8WU39 189 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 SIGLEC10Q96LC7 697 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 C1orf74Q96LT6 269 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CCDC74BQ96LY2 380 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 TSGA13Q96PP4 275 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CYTH2Q99418 400 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 SELENOSQ9BQE4 189 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 EFHD1Q9BUP0 239 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 ASPSCR1Q9BZE9 553 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CEP44Q9C0F1 390 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 HECAQ9UBI9 543 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-202ENST00000595242 PILRAQ9UKJ1 303 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
SCAF1-202ENST00000595242 LOC101059948A0A1B0GTJ6 334 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 GMNCA6NCL1 334 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 ERI2A8K979 691 aaKnown RBP12.71□□□□□ -0.37
SCAF1-202ENST00000595242 B4DGG1 531 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 MKRN2OSH3BPM6 223 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 AREL1O15033 823 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 PRPF4O43172 522 aaKnown RBP eCLIP12.71□□□□□ -0.372e-6■■■■■ 27.5
SCAF1-202ENST00000595242 TNFP01375 233 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 APRTP07741 180 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 PTPN3P26045 913 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 EPHB2P29323 1055 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 ALDH4A1P30038 563 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 GKP32189 559 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.37
SCAF1-202ENST00000595242 SERPINH1P50454 418 aaKnown RBP12.71□□□□□ -0.37
SCAF1-202ENST00000595242 OR1D5P58170 312 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.37
SCAF1-202ENST00000595242 MTA1Q13330 715 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 NFATC4Q14934 902 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 IRF4Q15306 451 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 TMED2Q15363 201 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 ZNF805Q5CZA5 627 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 LRRC73Q5JTD7 316 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 DCAF12Q5T6F0 453 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 AFMIDQ63HM1 303 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 STEAP4Q687X5 459 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 RETSATQ6NUM9 610 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 C16orf46Q6P387 395 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 LRRC8BQ6P9F7 803 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 C3orf62Q6ZUJ4 267 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 TAF8Q7Z7C8 310 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 NLRP14Q86W24 1093 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 PALM2Q8IXS6 379 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 UNC5BQ8IZJ1 945 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 NLGN4XQ8N0W4 816 aa12.71□□□□□ -0.37
SCAF1-202ENST00000595242 CNPY4Q8N129 248 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms