RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TRIM32Q13049 653 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 SPIDRQ14159 915 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 PDCD4Q53EL6 469 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 C6orf136Q5SQH8 315 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 GPSM1Q86YR5 675 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 ZC3H7AQ8IWR0 971 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 PAPD5Q8NDF8 572 aaKnown RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 LPCAT1Q8NF37 534 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 CHID1Q9BWS9 393 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 MUC13Q9H3R2 512 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 PKD2L2Q9NZM6 624 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 IFT80Q9P2H3 777 aaPredicted RBP16.31■□□□□ 0.2
LIG1-206ENST00000594067 SEPT3Q9UH03 358 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 CORINQ9Y5Q5 1042 aa16.31■□□□□ 0.2
LIG1-206ENST00000594067 J3QRK9 145 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 KLK8O60259 260 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 TLR5O60602 858 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 CPNE6O95741 557 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 MC4RP32245 332 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 MAGEA11P43364 429 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 TRAF2Q12933 501 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 GRIK2Q13002 908 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 TAF1AQ15573 450 aaPredicted RBP16.3■□□□□ 0.2
LIG1-206ENST00000594067 KCNA10Q16322 511 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 PLA2G4EQ3MJ16 856 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 SPATS1Q496A3 300 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 CTSL3PQ5NE16 218 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 CCNYL2Q5T2Q4 361 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 C16orf87Q6PH81 154 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 ZBTB46Q86UZ6 589 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 EFHBQ8N7U6 833 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 TTC16Q8NEE8 873 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 OR13F1Q8NGS4 319 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 PROKR1Q8TCW9 393 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 GIPC2Q8TF65 315 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 FBXL8Q96CD0 374 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 SELENONQ9NZV5 590 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 UBA2Q9UBT2 640 aaPredicted RBP16.3■□□□□ 0.2
LIG1-206ENST00000594067 PCDHGC4Q9Y5F7 938 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 ZFP37Q9Y6Q3 630 aaPredicted RBP16.3■□□□□ 0.2
LIG1-206ENST00000594067 BRCA2P51587 3418 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 PLXNA3P51805 1871 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 C2orf81A6NN90 581 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 PRLP01236 227 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 UMPSP11172 480 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 BCAP31P51572 246 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 MAPK10P53779 464 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 HUNKP57058 714 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 PLIN5Q00G26 463 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 EMX2Q04743 252 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 C18orf21Q32NC0 220 aaPredicted RBP16.3■□□□□ 0.2
LIG1-206ENST00000594067 AASDHQ4L235 1098 aaPredicted RBP16.3■□□□□ 0.2
LIG1-206ENST00000594067 ZRANB3Q5FWF4 1079 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 OTUD3Q5T2D3 398 aaPredicted RBP16.3■□□□□ 0.2
LIG1-206ENST00000594067 FAM171A1Q5VUB5 890 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 ALG1LQ6GMV1 187 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 Q6ZSR9 355 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 EFL1Q7Z2Z2 1120 aaKnown RBP16.3■□□□□ 0.2
LIG1-206ENST00000594067 CHPT1Q8WUD6 406 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 TRIB2Q92519 343 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 C1QTNF3Q9BXJ4 246 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 ZNF639Q9UID6 485 aa16.3■□□□□ 0.2
LIG1-206ENST00000594067 FAM234BA2RU67 622 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 TYW5A2RUC4 315 aaKnown RBP16.29■□□□□ 0.2
LIG1-206ENST00000594067 IQCF5A8MTL0 148 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 E2F3O00716 465 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 INSIG1O15503 277 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 B4GAT1O43505 415 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 CCNA2P20248 432 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 HTR6P50406 440 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 ERVPABLB-1P60509 514 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 RPS24P62847 133 aaKnown RBP16.29■□□□□ 0.2
LIG1-206ENST00000594067 SELPLGQ14242 412 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 AAK1Q2M2I8 961 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 ZIK1Q3SY52 487 aaPredicted RBP16.29■□□□□ 0.2
LIG1-206ENST00000594067 GLYATQ6IB77 296 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 TMEM214Q6NUQ4 689 aaKnown RBP16.29■□□□□ 0.2
LIG1-206ENST00000594067 PPM1MQ96MI6 270 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
LIG1-206ENST00000594067 PSKH2Q96QS6 385 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 RIC8BQ9NVN3 520 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 ZIM2Q9NZV7 527 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 H0Y858 1186 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 GPR39O43194 453 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 HTR1EP28566 365 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 MRPL19P49406 292 aaKnown RBP16.29■□□□□ 0.2
LIG1-206ENST00000594067 TMBIM6P55061 237 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 MTPNP58546 118 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 IL2P60568 153 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 ATP6AP1LQ52LC2 224 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 LETMD1Q6P1Q0 360 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 SLC15A4Q8N697 577 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 PNPT1Q8TCS8 783 aaKnown RBP16.29■□□□□ 0.2
LIG1-206ENST00000594067 CD200R1Q8TD46 325 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 NSMCE2Q96MF7 247 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 NEURL2Q9BR09 285 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 TLR9Q9NR96 1032 aa16.29■□□□□ 0.2
LIG1-206ENST00000594067 SLC30A1Q9Y6M5 507 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms