RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TRIM48Q8IWZ4 208 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 NIPA2Q8N8Q9 360 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 BMPERQ8N8U9 685 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 MNS1Q8NEH6 495 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 SCAMP4Q969E2 229 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 COX14Q96I36 57 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 NAP1L3Q99457 506 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 RIOK2Q9BVS4 552 aaKnown RBP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 PACSIN1Q9BY11 444 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 FAM83DQ9H4H8 585 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 UCK1Q9HA47 277 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 PCDH18Q9HCL0 1135 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 RBM22Q9NW64 420 aaKnown RBP eCLIP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 TTLL3Q9Y4R7 772 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 TMEM184BQ9Y519 407 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 UBR5O95071 2799 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 KIF26BQ2KJY2 2108 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 HECTD1Q9ULT8 2610 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 C1orf232A0A0U1RR37 186 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 MKRN2OSH3BPM6 223 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 NKX2-8O15522 239 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 GRID2O43424 1007 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 SNX2O60749 519 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 MTA2O94776 668 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 SOD1P00441 154 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 PDHA1P08559 390 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 ANKRD34CP0C6C1 535 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 PRKAR1AP10644 381 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 TNNT1P13805 278 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 GARSP41250 739 aaKnown RBP9.31□□□□□ -0.92
BRCA1-226ENST00000591534 GNG11P61952 73 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 GALNT2Q10471 571 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 IL11RAQ14626 422 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 PDK2Q15119 407 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 PPP2R5EQ16537 467 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 LACTB2Q53H82 288 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-226ENST00000591534 CCDC70Q6NSX1 233 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 TRIM74Q86UV6 250 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 UBL4BQ8N7F7 174 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 KCTD6Q8NC69 237 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 STARD8Q92502 1023 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 SEC14L1Q92503 715 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 NSMCE3Q96MG7 304 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 LYSMD1Q96S90 227 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 CTRCQ99895 268 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 MLPHQ9BV36 600 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-226ENST00000591534 TDRD1Q9BXT4 1180 aaKnown RBP9.31□□□□□ -0.92
BRCA1-226ENST00000591534 EPN3Q9H201 632 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 CARD9Q9H257 536 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 LIN7BQ9HAP6 207 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 PCDH9Q9HC56 1237 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 LZTFL1Q9NQ48 299 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 ETNK2Q9NVF9 386 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 TRMT1Q9NXH9 659 aaKnown RBP9.31□□□□□ -0.92
BRCA1-226ENST00000591534 DNAJB12Q9NXW2 375 aaKnown RBP9.31□□□□□ -0.92
BRCA1-226ENST00000591534 TMEM9Q9P0T7 183 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 ANKMY1Q9P2S6 941 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 CPNE7Q9UBL6 633 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 FAM8A1Q9UBU6 413 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 TBC1D29Q9UFV1 150 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 ANAPC7Q9UJX3 599 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 KCND3Q9UK17 655 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 PYCARDQ9ULZ3 195 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 CHKBQ9Y259 395 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 PLEKHM1Q9Y4G2 1056 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 ST14Q9Y5Y6 855 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 UNC13CQ8NB66 2214 aa9.31□□□□□ -0.92
BRCA1-226ENST00000591534 LILRA5A6NI73 299 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 CES2O00748 559 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 NUAK1O60285 661 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 DNAJC6O75061 913 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ZNF189O75820 626 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 CLDN7O95471 211 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 VIPP01282 170 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 MT-ND3P03897 115 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 CYP1A2P05177 515 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 KRT7P08729 469 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ACP5P13686 325 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 AMD1P17707 334 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 TCP1P17987 556 aaKnown RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 VCLP18206 1134 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 SOX18P35713 384 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 STAT5AP42229 794 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 SPINT3P49223 89 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 CLCNKAP51800 687 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 CKAP4Q07065 602 aaKnown RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 SRSF1Q07955 248 aaKnown RBP eCLIP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 FOXM1Q08050 763 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 KLRB1Q12918 225 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 PAFAH1B3Q15102 231 aaKnown RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 SKIDA1Q1XH10 827 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 DEFB109BQ30KR1 87 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ODF2Q5BJF6 829 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ZNF569Q5MCW4 686 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 PDPK2PQ6A1A2 396 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 C6orf15Q6UXA7 325 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ZNF761Q86XN6 746 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 RBM12BQ8IXT5 1001 aaKnown RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 TEX19Q8NA77 164 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms