RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 AGAP14A8MT82 685 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 PPM1DO15297 605 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 B4GAT1O43505 415 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 LDB2O43679 373 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 TLX3O43711 291 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A9O60656 530 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 KRT37O76014 449 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 PRAMEF1O95521 474 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 MPOP05164 745 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A6P19224 532 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A1P22309 533 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A4P22310 534 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 PSMA3P25788 255 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 CCKBRP32239 447 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A3P35503 534 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A5P35504 534 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 GPR3P46089 330 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 LSSP48449 732 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 XIAPP98170 497 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 ZFP36L1Q07352 338 aaKnown RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 TMEM115Q12893 351 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 ITGA9Q13797 1035 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 CCNG2Q16589 344 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 GPRC6AQ5T6X5 926 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 IYDQ6PHW0 289 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 IGF2-ASQ6U949 168 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 TMPRSS9Q7Z410 1059 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 LRRTM4Q86VH4 590 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 SLITRK4Q8IW52 837 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 REXO1L1PQ8IX06 675 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 Q8N9G6 341 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 GLIS1Q8NBF1 620 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 OR4K2Q8NGD2 314 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 SLC37A2Q8TED4 501 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 LIN37Q96GY3 246 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 PRR11Q96HE9 360 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 PDLIM2Q96JY6 352 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 GFM1Q96RP9 751 aaKnown RBP11.04□□□□□ -0.64
SMAD4-211ENST00000590499 TIMM29Q9BSF4 260 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 SYNDIG1Q9H7V2 258 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 LRRC40Q9H9A6 602 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 POLR1BQ9H9Y6 1135 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A7Q9HAW7 530 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A10Q9HAW8 530 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 UGT1A8Q9HAW9 530 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 ASCL3Q9NQ33 180 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 AK5Q9Y6K8 562 aa11.04□□□□□ -0.64
SMAD4-211ENST00000590499 MGAQ8IWI9 3026 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 ERI2A8K979 691 aaKnown RBP11.03□□□□□ -0.64
SMAD4-211ENST00000590499 RHPN2P1A8MT19 583 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 KMOO15229 486 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 ATXN7O15265 892 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-211ENST00000590499 SUN1O94901 812 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 CDK14O94921 469 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 CRTAMO95727 393 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 FGGP02679 453 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 F3P13726 295 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF7P17097 686 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-211ENST00000590499 CTSCP53634 463 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 OR1D5P58170 312 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 GABREP78334 506 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 PDE1BQ01064 536 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 NFATC2Q13469 925 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 SNX1Q13596 522 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 CLPPQ16740 277 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-211ENST00000590499 TBC1D25Q3MII6 688 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 LDLRAP1Q5SW96 308 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 PRUNE1Q86TP1 453 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 RASGEF1AQ8N9B8 481 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 OR13C4Q8NGS5 318 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF398Q8TD17 642 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 FOXP3Q9BZS1 431 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 SARS2Q9NP81 518 aaKnown RBP11.03□□□□□ -0.64
SMAD4-211ENST00000590499 KLC4Q9NSK0 619 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 SATB2Q9UPW6 733 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 ZNF148Q9UQR1 794 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 ZKSCAN5Q9Y2L8 839 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 PCDHGA8Q9Y5G5 932 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 ADAMTS20P59510 1910 aa11.03□□□□□ -0.64
SMAD4-211ENST00000590499 A0A087WV48 116 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 IGHV1OR21-1A0A087WYE8 117 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 CCDC187A0A096LP49 1063 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 KIR2DS5A0A0G2JLQ3 304 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 A0A0G2JNG1 304 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 MROH6A6NGR9 719 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 H7C0S8 307 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 KIR2DS3K7RE56 304 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 PSMD3O43242 534 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 SRP72O76094 671 aaKnown RBP11.02□□□□□ -0.65
SMAD4-211ENST00000590499 CPNE6O95741 557 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 IFNB1P01574 187 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 ETS1P14921 441 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 TPH1P17752 444 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 CD1CP29017 333 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 CXCR5P32302 372 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 CSF2RBP32927 897 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 FDFT1P37268 417 aa11.02□□□□□ -0.65
SMAD4-211ENST00000590499 ATP1A2P50993 1020 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms