RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 KMOO15229 486 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 MFSD11O43934 449 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 SLC4A1P02730 911 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 HLA-DQB2P05538 268 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 FECHP22830 423 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 RORAP35398 523 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 GLRBP48167 497 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 TUBB4BP68371 445 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 TUBB2AQ13885 445 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 GALNT3Q14435 633 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 NAA30Q147X3 362 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 SYCP1Q15431 976 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 ZNF569Q5MCW4 686 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 VWA5B1Q5TIE3 1220 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 ALG1LQ6GMV1 187 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 SPOCD1Q6ZMY3 1216 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 LRRTM4Q86VH4 590 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 HPS6Q86YV9 775 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 TMEM102Q8N9M5 508 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 NSMCE1Q8WV22 266 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 GLYATL1Q969I3 302 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 TUBB2BQ9BVA1 445 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 TLR10Q9BXR5 811 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 NLNQ9BYT8 704 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 ILKAPQ9H0C8 392 aaPredicted RBP12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 KCND1Q9NSA2 647 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 PCMTD2Q9NV79 361 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 PARVAQ9NVD7 372 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 ANO10Q9NW15 660 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 PSMD13Q9UNM6 376 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 SHOC2Q9UQ13 582 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 PCDHGA10Q9Y5H3 936 aa12.48□□□□□ -0.41
PRKCSH-210ENST00000589990 SEC16AO15027 2179 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 RNF8O76064 485 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 MMP2P08253 660 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 RAB40ALP0C0E4 278 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 RARAP10276 462 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 EEF1GP26641 437 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 OTX2P32243 289 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 ARL4DP49703 201 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 HSD11B2P80365 405 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 ANKRD20A8PQ5CZ79 823 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 ZNF789Q5FWF6 425 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 DNTTIP2Q5QJE6 756 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 AGAP9Q5VTM2 703 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 DUS1LQ6P1R4 473 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 FAM83HQ6ZRV2 1179 aaPredicted RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 MED25Q71SY5 747 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 PSTKQ8IV42 348 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 NRTNQ99748 197 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 TIMM29Q9BSF4 260 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 PCDH18Q9HCL0 1135 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 RBM22Q9NW64 420 aaKnown RBP eCLIP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 G3BP2Q9UN86 482 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 CFAP20Q9Y6A4 193 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 PKDREJQ9NTG1 2253 aa12.47□□□□□ -0.41
PRKCSH-210ENST00000589990 UBA6A0AVT1 1052 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 OR5K3A6NET4 321 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 TLCD2A6NGC4 264 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 ANKRD66B4E2M5 251 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 KLK3P07288 261 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 CD48P09326 243 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 DESP17661 470 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 IDSP22304 550 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 ARL4AP40617 200 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 KPNA2P52292 529 aaKnown RBP12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 RPE65Q16518 533 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 STX1AQ16623 288 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 CYB5D1Q6P9G0 228 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 WASH2PQ6VEQ5 465 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 MRGPREQ86SM8 312 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 KCNMB4Q86W47 210 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 BPHLQ86WA6 291 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 RAVER1Q8IY67 606 aaKnown RBP12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 SYTL1Q8IYJ3 562 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 ST6GALNAC3Q8NDV1 305 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 OR1L3Q8NH93 324 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 MAML1Q92585 1016 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 SGSM3Q96HU1 749 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 NUP85Q9BW27 656 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 C5AR2Q9P296 337 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 ITGB1BP2Q9UKP3 347 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 DNPEPQ9ULA0 475 aa12.46□□□□□ -0.41
PRKCSH-210ENST00000589990 SYCE3A1L190 88 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 RGSL1A5PLK6 1076 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 GPR39O43194 453 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 KLF7O75840 302 aaPredicted RBP12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 CDK14O94921 469 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 SNRPB2P08579 225 aaKnown RBP12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 CD86P42081 329 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 ZNF135P52742 658 aaPredicted RBP12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 RRADP55042 308 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 GSDMDP57764 484 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 TYRO3Q06418 890 aa12.45□□□□□ -0.42
PRKCSH-210ENST00000589990 NCF4Q15080 339 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms