RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 GRTP1Q5TC63 336 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 ASCL5Q7RTU5 278 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 AMZ2Q86W34 360 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 ZNF547Q8IVP9 402 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 DCLK2Q8N568 766 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
VMP1-210ENST00000589823 MRRFQ96E11 262 aaKnown RBP13.41□□□□□ -0.26
VMP1-210ENST00000589823 LINC00615Q96LM1 132 aaPredicted RBP13.41□□□□□ -0.26
VMP1-210ENST00000589823 CCM2Q9BSQ5 444 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 EDEM2Q9BV94 578 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 LRRC61Q9BV99 259 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 GSDMCQ9BYG8 508 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 IL21RQ9HBE5 538 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 PARD6AQ9NPB6 346 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 TM7SF3Q9NS93 570 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 DOLKQ9UPQ8 538 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 PCYT1BQ9Y5K3 369 aaPredicted RBP13.41□□□□□ -0.26
VMP1-210ENST00000589823 PSAT1Q9Y617 370 aa13.41□□□□□ -0.26
VMP1-210ENST00000589823 C17orf113A0A1B0GUU1 675 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 NEMP2A6NFY4 417 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 MGAT4DA6NG13 374 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 SDC3O75056 442 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 TRIM16O95361 564 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 INHBAP08476 426 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 CHRM3P20309 590 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 DGKAP23743 735 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 GABRB3P28472 473 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 EPHA8P29322 1005 aaPredicted RBP13.4□□□□□ -0.26
VMP1-210ENST00000589823 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
VMP1-210ENST00000589823 HSD17B3P37058 310 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 MSH2P43246 934 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 BNIP3Q12983 259 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 TCEA2Q15560 299 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 UAP1Q16222 522 aaPredicted RBP13.4□□□□□ -0.26
VMP1-210ENST00000589823 CTSL3PQ5NE16 218 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 TAF8Q7Z7C8 310 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 C11orf96Q7Z7L8 435 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 ZC3HC1Q86WB0 502 aaKnown RBP13.4□□□□□ -0.26
VMP1-210ENST00000589823 GKN2Q86XP6 184 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 SDR16C5Q8N3Y7 309 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 MREGQ8N565 214 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 GPATCH11Q8N954 259 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 ZNF548Q8NEK5 533 aaPredicted RBP13.4□□□□□ -0.26
VMP1-210ENST00000589823 OR2I1PQ8NGU4 316 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 OR2L2Q8NH16 312 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 GPBAR1Q8TDU6 330 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 ATXN7L3BQ96GX2 97 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 BIRC8Q96P09 236 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 AARSD1Q9BTE6 412 aaKnown RBP13.4□□□□□ -0.26
VMP1-210ENST00000589823 EPB41L4BQ9H329 900 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 OSGEPL1Q9H4B0 414 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 RHOJQ9H4E5 214 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 KLC4Q9NSK0 619 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 ARGLU1Q9NWB6 273 aaPredicted RBP13.4□□□□□ -0.26
VMP1-210ENST00000589823 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 KCNK6Q9Y257 313 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 DNAJC16Q9Y2G8 782 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 GPR179Q6PRD1 2367 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 PI4KAP42356 2102 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 CACNA1EQ15878 2313 aa13.4□□□□□ -0.26
VMP1-210ENST00000589823 PCDH15Q96QU1 1955 aa13.4□□□□□ -0.27
VMP1-210ENST00000589823 IQCF5A8MTL0 148 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 POC1B-GALNT4F8VUJ3 575 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 KPNA5O15131 536 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 VPS26AO75436 327 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ANXA6P08133 673 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ITGB6P18564 788 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 AK4P27144 223 aaPredicted RBP13.39□□□□□ -0.27
VMP1-210ENST00000589823 ACTR1BP42025 376 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ABCG1P45844 678 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ACTR1AP61163 376 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ARHGAP8P85298 464 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 SUZ12Q15022 739 aaKnown RBP13.39□□□□□ -0.27
VMP1-210ENST00000589823 TMED2Q15363 201 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 SHBQ15464 509 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 FAM45BPQ6NSW5 357 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 UGT3A1Q6NUS8 523 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ZNF549Q6P9A3 640 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 SLC30A9Q6PML9 568 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 TAOK1Q7L7X3 1001 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 KRT222Q8N1A0 295 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 CCL4L1Q8NHW4 92 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 FAM45AQ8TCE6 357 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 HM13Q8TCT9 377 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 SLC44A1Q8WWI5 657 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ELMO1Q92556 727 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 KCNJ9Q92806 393 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 ELMO2Q96JJ3 720 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 PAFAH2Q99487 392 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 NDNQ99608 321 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 RBBP8Q99708 897 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 SARS2Q9NP81 518 aaKnown RBP13.39□□□□□ -0.27
VMP1-210ENST00000589823 TMEM9BQ9NQ34 198 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 DNAAF2Q9NVR5 837 aaKnown RBP13.39□□□□□ -0.27
VMP1-210ENST00000589823 TAS2R13Q9NYV9 303 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 FAM8A1Q9UBU6 413 aa13.39□□□□□ -0.27
VMP1-210ENST00000589823 PLEKHM1Q9Y4G2 1056 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms