RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 PDIA2Q13087 525 aaKnown RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 KIR2DS5Q14953 304 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 TMED2Q15363 201 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 SMAD1Q15797 465 aaKnown RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 PTRHD1Q6GMV3 140 aaKnown RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 GUSBP11Q6P575 273 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC9B2Q86UD5 537 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 KCNMB4Q86W47 210 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 LRRC6Q86X45 466 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 ZBED8Q8IZ13 594 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 BEND7Q8N7W2 519 aaPredicted RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 GPR156Q8NFN8 814 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 OR2L2Q8NH16 312 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 WDR48Q8TAF3 677 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 SIGLEC10Q96LC7 697 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 LINC00615Q96LM1 132 aaPredicted RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 TCF12Q99081 682 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 CCM2Q9BSQ5 444 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 FAM129AQ9BZQ8 928 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 PHACTR1Q9C0D0 580 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 CCDC68Q9H2F9 335 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 SPATS2LQ9NUQ6 558 aaKnown RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 TBC1D29Q9UFV1 150 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 MTRF1LQ9UGC7 380 aaKnown RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 PLEKHM1Q9Y4G2 1056 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 PCYT1BQ9Y5K3 369 aaPredicted RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 EME2A4GXA9 379 aaPredicted RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 H3BMM5 538 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 IFRD1O00458 451 aaPredicted RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 PRMT5O14744 637 aaPredicted RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 EIF3HO15372 352 aaKnown RBP eCLIP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 NUDT21O43809 227 aaKnown RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 ZNF500O60304 480 aaPredicted RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 NOBOXO60393 691 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 BANF1O75531 89 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 CA5AP35218 305 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 ELK3P41970 407 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 EIF3BP55884 814 aaKnown RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 MAZP56270 477 aaKnown RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC7A5Q01650 507 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 HHEXQ03014 270 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 HLTFQ14527 1009 aaKnown RBP eCLIP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 NEPROQ6NW34 567 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 OGFOD3Q6PK18 319 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 CCDC25Q86WR0 208 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 CLDN19Q8N6F1 224 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 FBXO36Q8NEA4 188 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 GSDMBQ8TAX9 411 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 PYROXD1Q8WU10 500 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 CCDC74AQ96AQ1 378 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 SH3KBP1Q96B97 665 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 CXorf40BQ96DE9 158 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 PANX3Q96QZ0 392 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 LRRC1Q9BTT6 524 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 CARD6Q9BX69 1037 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 FOXP3Q9BZS1 431 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 INTS10Q9NVR2 710 aaKnown RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 GRHL1Q9NZI5 618 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 MARCH4Q9P2E8 410 aaPredicted RBP11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 ACSL5Q9ULC5 683 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 PCDHB1Q9Y5F3 818 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 SPTBN4Q9H254 2564 aa11.67□□□□□ -0.54
SDHDP1-201ENST00000588055 ZCWPW2A0A1B0GU75 182 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 C17orf113A0A1B0GUU1 675 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 ESYT3A0FGR9 886 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 GOLGA8KD6RF30 607 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 E5RI56 91 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 GOLGA8TH3BQL2 631 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 LIN7AO14910 233 aaPredicted RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 VIPP01282 170 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 MYF5P13349 255 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 ARNTP27540 789 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 RPL10P27635 214 aaKnown RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 ARCN1P48444 511 aaKnown RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 DRG2P55039 364 aaKnown RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 PLOD1Q02809 727 aaPredicted RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 FOXC1Q12948 553 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 BOP1Q14137 746 aaKnown RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 NFE2L1Q14494 772 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 TYSND1Q2T9J0 566 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 MSS51Q4VC12 460 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 HP1BP3Q5SSJ5 553 aaPredicted RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 AGAP9Q5VTM2 703 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 WASH2PQ6VEQ5 465 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 CILP2Q8IUL8 1156 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 NAGSQ8N159 534 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 GALNT15Q8N3T1 639 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 SFRP1Q8N474 314 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 NOA1Q8NC60 698 aaKnown RBP11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 GPR150Q8NGU9 434 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 FBXO25Q8TCJ0 367 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC37A2Q8TED4 501 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 ELMO1Q92556 727 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 ART4Q93070 314 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 CERS2Q96G23 380 aa11.66□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC38A3Q99624 504 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms