RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 ASB9Q96DX5 294 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 GPR62Q9BZJ7 368 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 REXO4Q9GZR2 422 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 LEF1Q9UJU2 399 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 ANKRD33BA6NCL7 494 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 HTRA2O43464 458 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 NADKO95544 446 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 NDST3O95803 873 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 IMPDH2P12268 514 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 RHDQ02161 417 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 TUBB3Q13509 450 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 UPP1Q16831 310 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 TECRLQ5HYJ1 363 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 OTUD1Q5VV17 481 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 ANKRD26P1Q6NSI1 321 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 ABRAXAS1Q6UWZ7 409 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 SCD5Q86SK9 330 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 ARL14EPQ8N8R7 260 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 SMYD1Q8NB12 490 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 KCTD13Q8WZ19 329 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 TAMM41Q96BW9 452 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 MTERF1Q99551 399 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 HERC2P3Q9BVR0 1158 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 TRIM39Q9HCM9 518 aa13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-209ENST00000587525 RAD51BO15315 384 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 PRAMEF1O95521 474 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ATP5BP06576 529 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 HERVK_113P63132 956 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 SFSWAPQ12872 951 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 RSBN1Q5VWQ0 802 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 FAM180BQ6P0A1 224 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ERI1Q8IV48 349 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ERVK-6Q9BXR3 956 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 RAD21L1Q9H4I0 556 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 OSER1Q9NX31 292 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 H0Y858 1186 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 NME4O00746 187 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 KPNA5O15131 536 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 COL6A2P12110 1019 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 BCL2L1Q07817 233 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 HECTD3Q5T447 861 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 BORCS5Q969J3 196 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ISOC1Q96CN7 298 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 YIPF2Q9BWQ6 316 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 GIMAP4Q9NUV9 329 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 GLTPD2A6NH11 291 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 SAP18O00422 153 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 GLUD1P00367 558 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 FGF1P05230 155 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 DBTP11182 482 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 IDO1P14902 403 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ZNF7P17097 686 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ZNF678Q5SXM1 525 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 NCCRP1Q6ZVX7 275 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 PIWIL3Q7Z3Z3 882 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ISCA2Q86U28 154 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 ARHGAP12Q8IWW6 846 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 SLC15A3Q8IY34 581 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 C2CD4AQ8NCU7 369 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 DNMT3LQ9UJW3 386 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 SPO11Q9Y5K1 396 aa13.59□□□□□ -0.23
CACNA1A-209ENST00000587525 COL2A1P02458 1487 aaPredicted RBP13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 CBFA2T3O75081 653 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 S1PR4O95977 384 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 UGT2B4P06133 528 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 PRIM2P49643 509 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 MERTKQ12866 999 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 GTDC1Q4AE62 458 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 ANKS3Q6ZW76 656 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 RETREG3Q86VR2 466 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 LMNTD1Q8N9Z9 388 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 POC5Q8NA72 575 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 FNDC8Q8TC99 324 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 LZICQ8WZA0 190 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 SLC8A2Q9UPR5 921 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 PCDHGA7Q9Y5G6 932 aa13.58□□□□□ -0.23
CACNA1A-209ENST00000587525 FMO3P31513 532 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 MAGEA3P43357 314 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 OR4D2P58180 307 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 GRB14Q14449 540 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 SF1Q15637 639 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 TXNDC8Q6A555 127 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 DUS1LQ6P1R4 473 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 CRTC3Q6UUV7 619 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 CROCCP3Q8IVE0 287 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 SMOXQ9NWM0 555 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 POLR2AP24928 1970 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 C16orf96A6NNT2 1141 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 TAF4O00268 1085 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 FBP2O00757 339 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 NPHS1O60500 1241 aa13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 FADS2O95864 444 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-209ENST00000587525 GSRP00390 522 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms