RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 KCNJ13O60928 360 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 NIPSNAP2O75323 286 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 TNFP01375 233 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 DMPKQ09013 629 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 IFFO1Q0D2I5 559 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 CASP8Q14790 479 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 ZNF423Q2M1K9 1284 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 BEND7Q8N7W2 519 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 GPATCH11Q8N954 259 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 OR2W6PQ8NHA6 318 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 MRRFQ96E11 262 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 ATXN7L3BQ96GX2 97 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 NDNQ99608 321 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 CCM2Q9BSQ5 444 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 ROPN1BQ9BZX4 212 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 ROPN1Q9HAT0 212 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 FAM86C1Q9NVL1 165 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 DNAJC28Q9NX36 388 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 EURLQ9NYK6 297 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 ZNHIT2Q9UHR6 403 aa16.7■□□□□ 0.26
PRKCSH-203ENST00000586486 ZFC3H1O60293 1989 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 H3BM21 787 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 CDH16O75309 829 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 KRT38O76015 456 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 RXRGP48443 463 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 ZNF658BQ4V348 819 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 IL27RAQ6UWB1 636 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 LRIG3Q6UXM1 1119 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 RIBC1Q8N443 379 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 LKAAEAR1Q8TD35 194 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 EPS8L3Q8TE67 593 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 ANKRD7Q92527 254 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 ELF4Q99607 663 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 NUSAP1Q9BXS6 441 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 SLC13A1Q9BZW2 595 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 LATS2Q9NRM7 1088 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 KLHL42Q9P2K6 505 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 GULP1Q9UBP9 304 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 VWA7Q9Y334 891 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 PRKAB1Q9Y478 270 aa16.69■□□□□ 0.26
PRKCSH-203ENST00000586486 GPR179Q6PRD1 2367 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 HMX2A2RU54 273 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 MGAT4DA6NG13 374 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 PRR19A6NJB7 356 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 IQCF5A8MTL0 148 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 E5RI56 91 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 PROB1E7EW31 1015 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 ARHGAP33O14559 1287 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 DFNA5O60443 496 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 LRP3O75074 770 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 VPS26AO75436 327 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 POP7O75817 140 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 SYPP08247 313 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 JUNDP17535 347 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 FDXRP22570 491 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 CLCNKAP51800 687 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 HNRNPKP61978 463 aaKnown RBP eCLIP16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 POU4F1Q01851 419 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 HECTD2Q5U5R9 776 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 RD3Q7Z3Z2 195 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 AMZ2Q86W34 360 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 OR2L2Q8NH16 312 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 HM13Q8TCT9 377 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 ELMO2Q96JJ3 720 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 ZIM3Q96PE6 472 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 TCEAL2Q9H3H9 227 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 SPATS2LQ9NUQ6 558 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 TAS2R13Q9NYV9 303 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 MTO1Q9Y2Z2 717 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 GPSM3Q9Y4H4 160 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 RALGAPA1Q6GYQ0 2036 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 ADAMTS9Q9P2N4 1935 aa16.68■□□□□ 0.26
PRKCSH-203ENST00000586486 RASGRF2O14827 1237 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 KHNYNO15037 678 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 KPNA5O15131 536 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 KRT37O76014 449 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 TRIM16O95361 564 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ACP5P13686 325 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 VCLP18206 1134 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CHRM3P20309 590 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ARRB1P49407 418 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CLCN7P51798 805 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CDKN2DP55273 166 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ARHGAP8P85298 464 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 TIAL1Q01085 375 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ZNF844Q08AG5 666 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ZKSCAN8Q15776 578 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 INSCQ1MX18 579 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ZNF542PQ5EBM4 170 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 LGSNQ5TDP6 509 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 UGT3A1Q6NUS8 523 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CHST15Q7LFX5 561 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 DCLK2Q8N568 766 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ACVR1CQ8NER5 493 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 GPBAR1Q8TDU6 330 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ISL2Q96A47 359 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms