RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 DUX1O43812 170 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 POP7O75817 140 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 GOT2P00505 430 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 VIPP01282 170 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 RPLP0P05388 317 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 OR56A5P0C7T3 313 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 MAGEA3P43357 314 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 CTSCP53634 463 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 MAZP56270 477 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 UBE2IP63279 158 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 MRPS25P82663 173 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 B4GALNT1Q00973 533 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 DR1Q01658 176 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 CAMK2BQ13554 666 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 RTP5Q14D33 572 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 ISXQ2M1V0 245 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 DNAJC21Q5F1R6 531 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 RNASEH2BQ5TBB1 312 aaKnown RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 ANKRD22Q5VYY1 191 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 MRNIPQ6NTE8 343 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 TAS2R42Q7RTR8 314 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 JAMLQ86YT9 394 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 OR10G6Q8NH81 332 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 HDAC10Q969S8 669 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 LRRC39Q96DD0 335 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 SERPINB12Q96P63 405 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 TCF12Q99081 682 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 SLC38A3Q99624 504 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 TRIM51Q9BSJ1 452 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 ARFGAP3Q9NP61 516 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 CATSPERZQ9NTU4 200 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 AKAP7Q9P0M2 348 aaPredicted RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 CPNE7Q9UBL6 633 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 PCYT1BQ9Y5K3 369 aaPredicted RBP13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
PRKCSH-202ENST00000585540 RP1P56715 2156 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 ASXL3Q9C0F0 2248 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CCDC162PA2VCL2 907 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 FAM187AA6NFU0 413 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 OR2AG2A6NM03 316 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 LIN7AO14910 233 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 GPR39O43194 453 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 SNX2O60749 519 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CSO75390 466 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 DXOO77932 396 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 USP1O94782 785 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 TMEM63AO94886 807 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 TTC4O95801 387 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 PROS1P07225 676 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 SLC35G4P0C7Q5 338 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 OGNP20774 298 aaKnown RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 MGAT1P26572 445 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CD151P48509 253 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 ARSDP51689 593 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 TARDBPQ13148 414 aaKnown RBP eCLIP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 TCEA2Q15560 299 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 DBN1Q16643 649 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 MAP9Q49MG5 647 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 FNBP1LQ5T0N5 605 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 ZNF648Q5T619 568 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 METRNLQ641Q3 311 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 ZNF572Q7Z3I7 529 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 SDCCAG8Q86SQ7 713 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 KDF1Q8NAX2 398 aaPredicted RBP13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 OR6P1Q8NGX9 317 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 KIF18AQ8NI77 898 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CALML6Q8TD86 181 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CXorf40BQ96DE9 158 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 PANX3Q96QZ0 392 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CAAP1Q9H8G2 361 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CHRAC1Q9NRG0 131 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 KCNK4Q9NYG8 393 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 SLC23A2Q9UGH3 650 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 DNAJC16Q9Y2G8 782 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 PRKAB1Q9Y478 270 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 PLEKHM1Q9Y4G2 1056 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 PCDHGA8Q9Y5G5 932 aa13.56□□□□□ -0.24
PRKCSH-202ENST00000585540 CCDC187A0A096LP49 1063 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 H3BMM5 538 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 IFRD1O00458 451 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 PRMT5O14744 637 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 HGSO14964 777 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 KPNA5O15131 536 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 KDM1AO60341 852 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 RPS3P23396 243 aaKnown RBP eCLIP13.55□□□□□ -0.245e-18■■□□□ 11.4
PRKCSH-202ENST00000585540 INHBCP55103 352 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 ADARP55265 1226 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 WHAMMP3Q1A5X7 153 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 PLA2G4EQ3MJ16 856 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 KLHL35Q6PF15 583 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 MICALCLQ6ZW33 695 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 PIM3Q86V86 326 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 CAND1Q86VP6 1230 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 GPR150Q8NGU9 434 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 WDR36Q8NI36 951 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 SGF29Q96ES7 293 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 AHCYL2Q96HN2 611 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 B3GNT4Q9C0J1 378 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms