RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 CERS2Q96G23 380 aa13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 CFAP36Q96G28 342 aa13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 LINC00615Q96LM1 132 aaPredicted RBP13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 C9orf72Q96LT7 481 aa13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 C20orf96Q9NUD7 363 aaPredicted RBP13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 SPATS2LQ9NUQ6 558 aaKnown RBP13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 NFU1Q9UMS0 254 aa13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 GPSM3Q9Y4H4 160 aa13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 DNMT3AQ9Y6K1 912 aaPredicted RBP13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 U3KQA8 63 aa13.12□□□□□ -0.31
CHAF1A-202ENST00000585371 IGF2RP11717 2491 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 COL27A1Q8IZC6 1860 aaPredicted RBP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 A6NCN8 305 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TPP1O14773 563 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 FLRT2O43155 660 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 SH3BP5O60239 455 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 EML2O95834 649 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 CTSEP14091 401 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 ZNF7P17097 686 aaPredicted RBP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 RPS3P23396 243 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 GABRB3P28472 473 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TNFRSF8P28908 595 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 NSG1P42857 185 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 SLC1A2P43004 574 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TTPAP49638 278 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 DMPKQ09013 629 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 CTBP1Q13363 440 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 GTF2H3Q13889 308 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TRIP6Q15654 476 aaKnown RBP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 DEFB133Q30KQ1 61 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TEDDM1Q5T9Z0 273 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 OGFOD3Q6PK18 319 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 CHST15Q7LFX5 561 aaPredicted RBP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 CCDC25Q86WR0 208 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 LMNTD2Q8IXW0 634 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 OR4C6Q8NH72 309 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 LPGAT1Q92604 370 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 CAMK1GQ96NX5 476 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 BIRC8Q96P09 236 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TCF12Q99081 682 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 FMO2Q99518 471 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TIMM29Q9BSF4 260 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 TXLNGYQ9BZA5 131 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 LRRC4CQ9HCJ2 640 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 SMYD2Q9NRG4 433 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 IARS2Q9NSE4 1012 aaKnown RBP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 NLGN3Q9NZ94 848 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 SLC17A6Q9P2U8 582 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 RALYQ9UKM9 306 aaKnown RBP13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 FBXO5Q9UKT4 447 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 PCOLCE2Q9UKZ9 415 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 ASXL3Q9C0F0 2248 aa13.11□□□□□ -0.31
CHAF1A-202ENST00000585371 RP1P56715 2156 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 CFAP99D6REC4 459 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 POP7O75817 140 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 FAM153BP0C7A2 387 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 ACP5P13686 325 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 MPP1Q00013 466 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 LRP8Q14114 963 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 HLTFQ14527 1009 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 SUZ12Q15022 739 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 ELOCQ15369 112 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 PLA2G4EQ3MJ16 856 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 FAM153CQ494X1 144 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 AARS2Q5JTZ9 985 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 CTSL3PQ5NE16 218 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 ZNF470Q6ECI4 717 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 MRNIPQ6NTE8 343 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 LVRNQ6Q4G3 990 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 FAM83HQ6ZRV2 1179 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 CYS1Q717R9 158 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 C17orf82Q86X59 251 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 TRAPPC5Q8IUR0 188 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 CHCHD4Q8N4Q1 142 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 EID2Q8N6I1 236 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 EIF1ADQ8N9N8 165 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 C2CD4AQ8NCU7 369 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 LKAAEAR1Q8TD35 194 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 SCG3Q8WXD2 468 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 ADAMTS14Q8WXS8 1223 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 DCUN1D1Q96GG9 259 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 ZNF514Q96K75 400 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 KLC4Q9NSK0 619 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 TAAR2Q9P1P5 351 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 MTRF1LQ9UGC7 380 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 KCNK6Q9Y257 313 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 MED16Q9Y2X0 877 aa13.1□□□□□ -0.31
CHAF1A-202ENST00000585371 NEMP2A6NFY4 417 aa13.09□□□□□ -0.31
CHAF1A-202ENST00000585371 MGAT4DA6NG13 374 aa13.09□□□□□ -0.31
CHAF1A-202ENST00000585371 CXorf49A8MYA2 514 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms