RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 EIF4E1BA6NMX2 242 aaKnown RBP17.69■□□□□ 0.42
SRSF1-208ENST00000584773 SRP72O76094 671 aaKnown RBP17.69■□□□□ 0.42
SRSF1-208ENST00000584773 LEPRP48357 1165 aaKnown RBP17.69■□□□□ 0.42
SRSF1-208ENST00000584773 GPR18Q14330 331 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 FNBP1LQ5T0N5 605 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 KCTD11Q693B1 232 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 XKR5Q6UX68 686 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 PRUNE1Q86TP1 453 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 AMZ2Q86W34 360 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 KLHDC8BQ8IXV7 354 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 SNRNP27Q8WVK2 155 aaKnown RBP17.69■□□□□ 0.42
SRSF1-208ENST00000584773 TTC9Q92623 222 aa17.69■□□□□ 0.42
SRSF1-208ENST00000584773 DNAJC1Q96KC8 554 aaKnown RBP17.69■□□□□ 0.42
SRSF1-208ENST00000584773 CFAP20Q9Y6A4 193 aaKnown RBP17.69■□□□□ 0.42
SRSF1-208ENST00000584773 CCDC78A2IDD5 438 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 SGTAO43765 313 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 PPFIA2O75334 1257 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 UBXN7O94888 489 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 MSH3P20585 1137 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 CDKN1CP49918 316 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-208ENST00000584773 PARP6Q2NL67 630 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 TAF1BQ53T94 588 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-208ENST00000584773 MANEAQ5SRI9 462 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 TMEM164Q5U3C3 297 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 AGAP9Q5VTM2 703 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 DUS1LQ6P1R4 473 aaKnown RBP17.68■□□□□ 0.42
SRSF1-208ENST00000584773 TXLNBQ8N3L3 684 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 LILRA3Q8N6C8 439 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-208ENST00000584773 TTC13Q8NBP0 860 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 CXorf40BQ96DE9 158 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 TGM7Q96PF1 710 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 ZCCHC2Q9C0B9 1178 aaKnown RBP17.68■□□□□ 0.42
SRSF1-208ENST00000584773 SEMA4CQ9C0C4 833 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 SLC40A1Q9NP59 571 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 POT1Q9NUX5 634 aa17.68■□□□□ 0.42
SRSF1-208ENST00000584773 MN1Q10571 1320 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-208ENST00000584773 ERVH48-1M5A8F1 160 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 LDB2O43679 373 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 CRTAMO95727 393 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 AMD1P17707 334 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 VCLP18206 1134 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 PPP1CAP62136 330 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 DMPKQ09013 629 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 LY6DQ14210 128 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 WASH2PQ6VEQ5 465 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 UCK1Q9HA47 277 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 ARNT2Q9HBZ2 717 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 WASH6PQ9NQA3 447 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 CRLS1Q9UJA2 301 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 PCDHGA3Q9Y5H0 932 aa17.67■□□□□ 0.42
SRSF1-208ENST00000584773 KALRNO60229 2985 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 B4E171 279 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 STMND1H3BQB6 276 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 CAPN5O15484 640 aaPredicted RBP17.66■□□□□ 0.42
SRSF1-208ENST00000584773 KIF1CO43896 1103 aaKnown RBP17.66■□□□□ 0.42
SRSF1-208ENST00000584773 TSPAN7P41732 249 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 SEPHS1P49903 392 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 CYP4F2P78329 520 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 RHDQ02161 417 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 SEPT6Q14141 434 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 POU6F1Q14863 301 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 RPE65Q16518 533 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 KCTD19Q17RG1 926 aaPredicted RBP17.66■□□□□ 0.42
SRSF1-208ENST00000584773 RNF10Q8N5U6 811 aaKnown RBP17.66■□□□□ 0.42
SRSF1-208ENST00000584773 AVL9Q8NBF6 648 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 SPDYE1Q8NFV5 336 aaPredicted RBP17.66■□□□□ 0.42
SRSF1-208ENST00000584773 C1orf54Q8WWF1 131 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 NKD1Q969G9 470 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 RTP4Q96DX8 246 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 C9orf72Q96LT7 481 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 DDA1Q9BW61 102 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 WWP1Q9H0M0 922 aa17.66■□□□□ 0.42
SRSF1-208ENST00000584773 BAHCC1Q9P281 2608 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 GOLGA6L6A8MZA4 724 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.65■□□□□ 0.42
SRSF1-208ENST00000584773 LIASO43766 372 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 C9P02748 559 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 ETS1P14921 441 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 CD82P27701 267 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 MC4RP32245 332 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 HALP42357 657 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 GSDMDP57764 484 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 MC2RQ01718 297 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 SNX1Q13596 522 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 LONRF2Q1L5Z9 754 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 DCAF12Q5T6F0 453 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 SEL1L2Q5TEA6 688 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 FAM92BQ6ZTR7 304 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 PLXDC1Q8IUK5 500 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 CCDC112Q8NEF3 446 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 INSM2Q96T92 566 aaPredicted RBP17.65■□□□□ 0.42
SRSF1-208ENST00000584773 B3GNT4Q9C0J1 378 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 EPB41L1Q9H4G0 881 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 LRRC40Q9H9A6 602 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 IMP3Q9NV31 184 aaKnown RBP17.65■□□□□ 0.42
SRSF1-208ENST00000584773 SIDT1Q9NXL6 827 aaKnown RBP17.65■□□□□ 0.42
SRSF1-208ENST00000584773 PCDHB11Q9Y5F2 797 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 PCDHGA4Q9Y5G9 962 aa17.65■□□□□ 0.42
SRSF1-208ENST00000584773 AGAP14A8MT82 685 aa17.64■□□□□ 0.41
SRSF1-208ENST00000584773 AP2A1O95782 977 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms