RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 CDT1Q9H211 546 aa11.77□□□□□ -0.53
CDK5RAP3-232ENST00000584168 FZD8Q9H461 694 aa11.77□□□□□ -0.53
CDK5RAP3-232ENST00000584168 RANGRFQ9HD47 186 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-232ENST00000584168 IFT80Q9P2H3 777 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CACNG4Q9UBN1 327 aa11.77□□□□□ -0.53
CDK5RAP3-232ENST00000584168 POLG2Q9UHN1 485 aa11.77□□□□□ -0.53
CDK5RAP3-232ENST00000584168 DNPEPQ9ULA0 475 aa11.77□□□□□ -0.53
CDK5RAP3-232ENST00000584168 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ACKR2O00590 384 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TOM1L1O75674 476 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TRAPPC2P0DI81 140 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TRAPPC2BP0DI82 140 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ACADMP11310 421 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 HOXD8P13378 290 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ARSEP51690 589 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CLCN4P51793 760 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 NFX1Q12986 1120 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 MAMLD1Q13495 774 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 POLD3Q15054 466 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CHI3L2Q15782 390 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TEX44Q53QW1 395 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 LIN9Q5TKA1 542 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CES4AQ5XG92 561 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 PMF1Q6P1K2 205 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 HTR3DQ70Z44 454 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 MILR1Q7Z6M3 343 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 BEST2Q8NFU1 509 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 NXNL1Q96CM4 212 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ZFP14Q9HCL3 533 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 HPF1Q9NWY4 346 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ING3Q9NXR8 418 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 HACD1B0YJ81 288 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GPR32O75388 356 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 WDPCPO95876 746 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 EPOP01588 193 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 HMGCRP04035 888 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CDK1P06493 297 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ENO3P13929 434 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TCN1P20061 433 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ME2P23368 584 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ACSL1P33121 698 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 PKNOX1P55347 436 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CSNK2BP67870 215 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GPS1Q13098 491 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ORC1Q13415 861 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CTF1Q16619 201 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GTDC1Q4AE62 458 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 BROXQ5VW32 411 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TMEM236Q5W0B7 351 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 PDPK2PQ6A1A2 396 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CHSY3Q70JA7 882 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 RTL10Q7L3V2 364 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GPAT4Q86UL3 456 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ADGRG2Q8IZP9 1017 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 OR7A2PQ8NGA2 310 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ZSCAN18Q8TBC5 510 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 SGTBQ96EQ0 304 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 PAFAH2Q99487 392 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 PDZD7Q9H5P4 517 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 FBXL12Q9NXK8 326 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TAS2R9Q9NYW1 312 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 VPS28Q9UK41 221 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ERVK-19Q9WJR5 959 aa11.76□□□□□ -0.53
CDK5RAP3-232ENST00000584168 LIASO43766 372 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 JUNP05412 331 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ZNF30P17039 623 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 KCNA5P22460 613 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GPC1P35052 558 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 RECQLP46063 649 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GNPDA1P46926 289 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 NUDT2P50583 147 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 EFNA5P52803 228 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 DEFA1P59665 94 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 DEFA3P59666 94 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 NKX3-2P78367 333 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GRIK2Q13002 908 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CEACAM7Q14002 265 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 SLC36A3Q495N2 470 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 CCNYL2Q5T2Q4 361 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 RNF148Q8N7C7 305 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 OR52B2Q96RD2 323 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 TRIM8Q9BZR9 551 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 NOL11Q9H8H0 719 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 MRPL47Q9HD33 250 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GRIP1Q9Y3R0 1128 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 SLC22A7Q9Y694 548 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 MEIS3P2A8K0S8 358 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 GOLGA8SH3BPF8 625 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 HAS3O00219 553 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 DLGAP1O14490 977 aa11.75□□□□□ -0.53
CDK5RAP3-232ENST00000584168 AIM2O14862 343 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms