RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 BIRC8Q96P09 236 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 PAIP2Q9BPZ3 127 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 P2RY12Q9H244 342 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 CAB39LQ9H9S4 337 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 NMRAL1Q9HBL8 299 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 KLHL42Q9P2K6 505 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 COPG2Q9UBF2 871 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 HCN2Q9UL51 889 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 PCDHB1Q9Y5F3 818 aa11.82□□□□□ -0.52
GGA3-217ENST00000583667 MUC22E2RYF6 1773 aaPredicted RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 GOLGA4Q13439 2230 aaKnown RBP11.82□□□□□ -0.52
GGA3-217ENST00000583667 GLYATL1P3A0A0U1RQE8 302 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 C16orf96A6NNT2 1141 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 H3BMM5 538 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 SLC28A2O43868 658 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 SNX3O60493 162 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 HLA-EP13747 358 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 PKMP14618 531 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 CPA3P15088 417 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 ITGALP20701 1170 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 LHCGRP22888 699 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 ITGB7P26010 798 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 SPINT3P49223 89 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 NFATC2Q13469 925 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 ACAP2Q15057 778 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 SMAD1Q15797 465 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 FAM83EQ2M2I3 478 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 FNDC3BQ53EP0 1204 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 RBM20Q5T481 1227 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 AGAP9Q5VTM2 703 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 LRRC66Q68CR7 880 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 RAPH1Q70E73 1250 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 DSG4Q86SJ6 1040 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 NRSN1Q8IZ57 195 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 OTUD6BQ8N6M0 293 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 ANKS4BQ8N8V4 417 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 GPATCH11Q8N954 259 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 BAHD1Q8TBE0 780 aaPredicted RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 ZNF398Q8TD17 642 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 KCNJ9Q92806 393 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 RAB7BQ96AH8 199 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 ATXN7L3BQ96GX2 97 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 PDLIM5Q96HC4 596 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 C7orf26Q96N11 449 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 TSNARE1Q96NA8 513 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 OLFM1Q99784 485 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 MRPL57Q9BQC6 102 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 PLCD4Q9BRC7 762 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 PITPNM3Q9BZ71 974 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 SYTL2Q9HCH5 934 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 LATS2Q9NRM7 1088 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 B4GALT6Q9UBX8 382 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 RUVBL2Q9Y230 463 aaKnown RBP11.81□□□□□ -0.52
GGA3-217ENST00000583667 MED16Q9Y2X0 877 aa11.81□□□□□ -0.52
GGA3-217ENST00000583667 IGLV3-16A0A075B6K0 115 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 GOLGA8CPA6NN73 597 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 G3V2L1 256 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 PLK4O00444 970 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 PRMT5O14744 637 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 AREL1O15033 823 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 PHGDHO43175 533 aaKnown RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 BNIP3LO60238 219 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 SNNO75324 88 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 H2AFYO75367 372 aaKnown RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 RBP1P09455 135 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 SBK3P0C264 359 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 C6P13671 934 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 ZNF7P17097 686 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 CDKN2DP55273 166 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 RPL6Q02878 288 aaKnown RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 KDSRQ06136 332 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 CAMK2GQ13555 558 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 PCLAFQ15004 111 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 SETMARQ53H47 684 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 ZRANB3Q5FWF4 1079 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 C16orf46Q6P387 395 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 TECPR1Q7Z6L1 1165 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 TBC1D1Q86TI0 1168 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 TTC7BQ86TV6 843 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 LDB1Q86U70 411 aaPredicted RBP11.8□□□□□ -0.52
GGA3-217ENST00000583667 TSPAN33Q86UF1 283 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 RBFAQ8N0V3 343 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 PAF1Q8N7H5 531 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 GPR26Q8NDV2 337 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 ULK4Q96C45 1275 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 HDAC8Q9BY41 377 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 ASB8Q9H765 288 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 BPIFA1Q9NP55 256 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 PCDH12Q9NPG4 1184 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 PRSS16Q9NQE7 514 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 SMOXQ9NWM0 555 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 TAS2R13Q9NYV9 303 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 PKD2L2Q9NZM6 624 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 CRYL1Q9Y2S2 319 aa11.8□□□□□ -0.52
GGA3-217ENST00000583667 OAS3Q9Y6K5 1087 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms