RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 J3QR06 171 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 SH2B2O14492 632 aaPredicted RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 SMAD9O15198 467 aaKnown RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 SLC22A2O15244 555 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 HIST1H2ABP04908 130 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 PLA2G4BP0C869 781 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 CEACAM1P13688 526 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 LIFP15018 202 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 HIST1H2ADP20671 130 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 EPHA2P29317 976 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 CLK1P49759 484 aaKnown RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 MMP15P51511 669 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 CCR9P51686 369 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 LRMPQ12912 555 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 GLDNQ6ZMI3 551 aaPredicted RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 HIST3H2AQ7L7L0 130 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 SMPDL3BQ92485 455 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 ZNF653Q96CK0 615 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 SEC62Q99442 399 aaKnown RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 RHNO1Q9BSD3 238 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 SEMA6AQ9H2E6 1030 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 C9orf78Q9NZ63 289 aaPredicted RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 RCC2Q9P258 522 aaKnown RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 DBNLQ9UJU6 430 aaKnown RBP3.66□□□□□ -1.82
COPS3-217ENST00000583160 RNF215Q9Y6U7 377 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 CFTRP13569 1480 aa3.66□□□□□ -1.82
COPS3-217ENST00000583160 OR2M5A3KFT3 312 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 TMEM189-UBE2V1I3L0A0 370 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 CRLF1O75462 422 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 EIF3JO75822 258 aaKnown RBP3.65□□□□□ -1.83
COPS3-217ENST00000583160 AGR2O95994 175 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 EIF2S1P05198 315 aaKnown RBP3.65□□□□□ -1.83
COPS3-217ENST00000583160 SELLP14151 372 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 RPS3AP61247 264 aaKnown RBP3.65□□□□□ -1.83
COPS3-217ENST00000583160 UBE2V1Q13404 147 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 MVPQ14764 893 aaKnown RBP3.65□□□□□ -1.83
COPS3-217ENST00000583160 SLC1A5Q15758 541 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 FFAR4Q5NUL3 377 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 ZNF534Q76KX8 674 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 CEP97Q8IW35 865 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 HACE1Q8IYU2 909 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 SPEM1Q8N4L4 309 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 OR2T12Q8NG77 320 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 MORC4Q8TE76 937 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 RFFLQ8WZ73 363 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 SEMA4DQ92854 862 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 ARHGEF2Q92974 986 aaKnown RBP3.65□□□□□ -1.83
COPS3-217ENST00000583160 LINC00479Q96M42 142 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 OPRPNQ99935 248 aaPredicted RBP3.65□□□□□ -1.83
COPS3-217ENST00000583160 SIX2Q9NPC8 291 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 ECHDC1Q9NTX5 307 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 TRMT1Q9NXH9 659 aaKnown RBP3.65□□□□□ -1.83
COPS3-217ENST00000583160 EHD2Q9NZN4 543 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 CACNG5Q9UF02 275 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 MRC2Q9UBG0 1479 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 STK36Q9NRP7 1315 aa3.65□□□□□ -1.83
COPS3-217ENST00000583160 PRDM2Q13029 1718 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 ARHGEF9O43307 516 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 TPD52L2O43399 206 aaKnown RBP3.64□□□□□ -1.83
COPS3-217ENST00000583160 TMCC2O75069 709 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 RTN3O95197 1032 aaPredicted RBP3.64□□□□□ -1.83
COPS3-217ENST00000583160 GCNT3O95395 438 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 CLEC3BP05452 202 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 ANXA7P20073 488 aaKnown RBP3.64□□□□□ -1.83
COPS3-217ENST00000583160 ACADLP28330 430 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 MSH2P43246 934 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 KCNJ10P78508 379 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 MED22Q15528 200 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 LPAL2Q16609 132 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 TSTQ16762 297 aaKnown RBP3.64□□□□□ -1.83
COPS3-217ENST00000583160 MEP1AQ16819 746 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 TPRG1Q6ZUI0 275 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 STXBP4Q6ZWJ1 553 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 FASTKD5Q7L8L6 764 aaKnown RBP3.64□□□□□ -1.83
COPS3-217ENST00000583160 CPLX4Q7Z7G2 160 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 HJURPQ8NCD3 748 aaPredicted RBP3.64□□□□□ -1.83
COPS3-217ENST00000583160 TRPC4APQ8TEL6 797 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 NUDCD1Q96RS6 583 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 ERVMER34-1Q9H9K5 563 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 PELI2Q9HAT8 420 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 ZDHHC18Q9NUE0 388 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 TSPYL4Q9UJ04 414 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 RASAL2Q9UJF2 1139 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 SMAD5-AS1Q9Y6J3 95 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 WIZO95785 1651 aa3.64□□□□□ -1.83
COPS3-217ENST00000583160 TDRD15B5MCY1 1934 aaKnown RBP3.64□□□□□ -1.83
COPS3-217ENST00000583160 PLK4O00444 970 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 TCERG1O14776 1098 aaKnown RBP3.63□□□□□ -1.83
COPS3-217ENST00000583160 SCAMP1O15126 338 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 OGG1O15527 345 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 GPR137BO60478 399 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 GPC4O75487 556 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 CCNDBP1O95273 360 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 HSPA1AP0DMV8 641 aaKnown RBP3.63□□□□□ -1.83
COPS3-217ENST00000583160 HSPA1BP0DMV9 641 aaKnown RBP3.63□□□□□ -1.83
COPS3-217ENST00000583160 CKMT2P17540 419 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 CBLP22681 906 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 NFKBIAP25963 317 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms