RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MBTD1Q05BQ5 628 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 NIPAL4Q0D2K0 466 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 ACVR2BQ13705 512 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 ADIPOQQ15848 244 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 HSP90AB4PQ58FF6 505 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 Q75L30 129 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 CCDC190Q86UF4 302 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 ARHGAP12Q8IWW6 846 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 PM20D2Q8IYS1 436 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 GBGT1Q8N5D6 347 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 EMC1Q8N766 993 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 BMPERQ8N8U9 685 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 TDRD7Q8NHU6 1098 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 SGCDQ92629 289 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 SEPT5Q99719 369 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 MAGIXQ9H6Y5 334 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 PRR34Q9NV39 138 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 MTMR10Q9NXD2 777 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 ACAD8Q9UKU7 415 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 B3GALT5Q9Y2C3 310 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 PIAS3Q9Y6X2 628 aa3.05□□□□□ -1.92
SMCHD1-206ENST00000581631 PRAG1Q86YV5 1406 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 DCXO43602 365 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 CREB3O43889 395 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 SYNCRIPO60506 623 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 ZFAND5O76080 213 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 TMEM63AO94886 807 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 CCNDBP1O95273 360 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 TSHBP01222 138 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 EIF2S1P05198 315 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 ZNF23P17027 643 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 ANXA7P20073 488 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 MCCP23508 829 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 GATA2P23769 480 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 MLLT10P55197 1068 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 CD81P60033 236 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 SOWAHCQ53LP3 525 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 XKR6Q5GH73 641 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 METTL7BQ6UX53 244 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 PLXDC2Q6UX71 529 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 GLDNQ6ZMI3 551 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 TMTC3Q6ZXV5 915 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 ANO5Q75V66 913 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 RNF168Q8IYW5 571 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 SLC5A8Q8N695 610 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 PDILTQ8N807 584 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 FGFBP3Q8TAT2 258 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 PPP4R1Q8TF05 950 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 UCMAQ8WVF2 138 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 ARHGEF2Q92974 986 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 C1orf74Q96LT6 269 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 C7orf26Q96N11 449 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 CABLES2Q9BTV7 478 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 EPB41L5Q9HCM4 733 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 EHD2Q9NZN4 543 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 ORC3Q9UBD5 711 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 UBA2Q9UBT2 640 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 PYGO1Q9Y3Y4 419 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 JRKLQ9Y4A0 524 aa3.04□□□□□ -1.92
SMCHD1-206ENST00000581631 ANKRD66B4E2M5 251 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 J3KRW8 73 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 MAP2K7O14733 419 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 BUD23O43709 281 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 PDE9AO76083 593 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 CD4P01730 458 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 MPP1Q00013 466 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 TFAP4Q01664 338 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 LRMPQ12912 555 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 ZSCAN23Q3MJ62 389 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 GKAP1Q5VSY0 366 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 TMEM198Q66K66 360 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 NCEH1Q6PIU2 408 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 PXKQ7Z7A4 578 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 LONP2Q86WA8 852 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 PAF1Q8N7H5 531 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 SLC38A9Q8NBW4 561 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 HJURPQ8NCD3 748 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 GSDMBQ8TAX9 411 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 ELMOD3Q96FG2 381 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 ABHD8Q96I13 439 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 TMEM39BQ9GZU3 492 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 SETD4Q9NVD3 440 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 ADPRHL2Q9NX46 363 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 AASSQ9UDR5 926 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 CORO1CQ9ULV4 474 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 ARHGEF40Q8TER5 1519 aa3.03□□□□□ -1.92
SMCHD1-206ENST00000581631 A0A0G2JNG1 304 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 A0A1W2PPI3 338 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 LIPT2A6NK58 231 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 B4E171 279 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 ZBTB43O43298 467 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 DAB1O75553 588 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 BMP10O95393 424 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 NR3C1P04150 777 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 TFAP2AP05549 437 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 LIPFP07098 398 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 RARGP13631 454 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 HRH2P25021 359 aa3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 PSMA4P25789 261 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-206ENST00000581631 TSPAN7P41732 249 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms