RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 TRIM55Q9BYV6 548 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 CEP41Q9BYV8 373 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 MLXIPLQ9NP71 852 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 TMEM63CQ9P1W3 806 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 TMPRSS11EQ9UL52 423 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 NENFQ9UMX5 172 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 WDR37Q9Y2I8 494 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 PCDHGB7Q9Y5F8 929 aa10.07□□□□□ -0.8
GGA3-210ENST00000580799 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
GGA3-210ENST00000580799 UNC79Q9P2D8 2635 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 SPTAN1Q13813 2472 aaKnown RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 A0A0A6YYK5 440 aaPredicted RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 KLHL33A6NCF5 533 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 APOL1O14791 398 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 CPNE3O75131 537 aaKnown RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 DNAJB5O75953 348 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 PDGFAP04085 211 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 EBLN1P0CF75 366 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 FOLR1P15328 257 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 ANP32AP39687 249 aaKnown RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 TNNT3P45378 269 aaPredicted RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 TUBB4BP68371 445 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 TUBB2AQ13885 445 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 KCNAB1Q14722 419 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 IQCB1Q15051 598 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 RPE65Q16518 533 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 DNTTIP2Q5QJE6 756 aaKnown RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 LDLRAP1Q5SW96 308 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 FHL5Q5TD97 284 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 ZNF517Q6ZMY9 492 aaPredicted RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 HPS6Q86YV9 775 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 D2HGDHQ8N465 521 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 BEND7Q8N7W2 519 aaPredicted RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 SPATA22Q8NHS9 363 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 ZFPM2Q8WW38 1151 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 TUBB2BQ9BVA1 445 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 MAK16Q9BXY0 300 aaKnown RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 GLOD4Q9HC38 313 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 IL26Q9NPH9 171 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 ACSS2Q9NR19 701 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 LATS2Q9NRM7 1088 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 CUEDC1Q9NWM3 386 aaPredicted RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 HACD3Q9P035 362 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 TRIM10Q9UDY6 481 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 PLEKHB1Q9UF11 243 aaPredicted RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 G3BP2Q9UN86 482 aaKnown RBP10.06□□□□□ -0.8
GGA3-210ENST00000580799 SPO11Q9Y5K1 396 aa10.06□□□□□ -0.8
GGA3-210ENST00000580799 UBA6A0AVT1 1052 aaPredicted RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 OR5K3A6NET4 321 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 C3orf70A6NLC5 250 aaPredicted RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 AURKAO14965 403 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 PMPCBO75439 489 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 SCRG1O75711 98 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 POP7O75817 140 aaKnown RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 ZBTB11O95625 1053 aaPredicted RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 MT-CYBP00156 380 aaPredicted RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 EPOP01588 193 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 GYPCP04921 128 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 KLK3P07288 261 aaPredicted RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 MTHFD1P11586 935 aaKnown RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 LPOP22079 712 aaPredicted RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 GNLYP22749 145 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 HNRNPH3P31942 346 aaKnown RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 SPAM1P38567 509 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 UQCRFS1P47985 274 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 GSDMDP57764 484 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 PPP1CAP62136 330 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 FANCCQ00597 558 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 LAMB3Q13751 1172 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 ITGA9Q13797 1035 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 CHRNA6Q15825 494 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 SLC18A3Q16572 532 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 TEX44Q53QW1 395 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 TMTC4Q5T4D3 741 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 LRRC38Q5VT99 294 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 IZUMO3Q5VZ72 239 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 FAM199XQ6PEV8 388 aaPredicted RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 BZW1Q7L1Q6 419 aaKnown RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 TMEM126BQ8IUX1 230 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 RASGEF1AQ8N9B8 481 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 DDHD1Q8NEL9 900 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 GPR150Q8NGU9 434 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 CPLX3Q8WVH0 158 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 TEKT5Q96M29 485 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 LRFN5Q96NI6 719 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 MAP3K3Q99759 626 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 ING2Q9H160 280 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 BPIFA1Q9NP55 256 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 KCND1Q9NSA2 647 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 IMP3Q9NV31 184 aaKnown RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 HRASLS2Q9NWW9 162 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 PSMD13Q9UNM6 376 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 FARSAQ9Y285 508 aaKnown RBP10.05□□□□□ -0.8
GGA3-210ENST00000580799 ZNF451Q9Y4E5 1061 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 MAP4K5Q9Y4K4 846 aa10.05□□□□□ -0.8
GGA3-210ENST00000580799 GLYATL1P3A0A0U1RQE8 302 aa10.04□□□□□ -0.8
GGA3-210ENST00000580799 LOC285095A0A1B0GVY8 99 aa10.04□□□□□ -0.8
GGA3-210ENST00000580799 SSU72P8A0A1W2PR75 194 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms