RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 PRPSAP1Q14558 356 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 TAF1AQ15573 450 aaPredicted RBP20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 TMEM139Q8IV31 216 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 EXD3Q8N9H8 876 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 OR4K2Q8NGD2 314 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 CXorf40BQ96DE9 158 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 C9orf72Q96LT7 481 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 SPRY4Q9C004 299 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 ZCCHC2Q9C0B9 1178 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 POT1Q9NUX5 634 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 PILRAQ9UKJ1 303 aa20.9■□□□□ 0.94
CSNK1D-215ENST00000580784 A0A0U1RQJ8 604 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 STK10O94804 968 aaKnown RBP20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 PRAMEF1O95521 474 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 MSLNQ13421 630 aaPredicted RBP20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 FAM83HQ6ZRV2 1179 aaPredicted RBP20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 CACNA2D3Q8IZS8 1091 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 NAT14Q8WUY8 206 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 SPATA13Q96N96 652 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 TGM7Q96PF1 710 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 TEFMQ96QE5 360 aaKnown RBP20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 SMOXQ9NWM0 555 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 FKBPLQ9UIM3 349 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 AMFRQ9UKV5 643 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 PACSIN2Q9UNF0 486 aaPredicted RBP20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 PSMD13Q9UNM6 376 aa20.89■□□□□ 0.93
CSNK1D-215ENST00000580784 C5orf60A6NFR6 353 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 CAPN5O15484 640 aaPredicted RBP20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 RAD1O60671 282 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 ITGB2P05107 769 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 ANKRD34CP0C6C1 535 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 LIFP15018 202 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 AKT1P31749 480 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 HALP42357 657 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 LEPRP48357 1165 aaKnown RBP20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 DMPKQ09013 629 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 NFE2L1Q14494 772 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 SPARCL1Q14515 664 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 FNBP1LQ5T0N5 605 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 CEACAM20Q6UY09 585 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 DET1Q7L5Y6 550 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 PEX26Q7Z412 305 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 BEND7Q8N7W2 519 aaPredicted RBP20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 RSC1A1Q92681 617 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 DESI2Q9BSY9 194 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 ASB8Q9H765 288 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 DNMT3AQ9Y6K1 912 aaPredicted RBP20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 BOD1L1Q8NFC6 3051 aa20.88■□□□□ 0.93
CSNK1D-215ENST00000580784 POLR1CO15160 346 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 KIF1CO43896 1103 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 SRP72O76094 671 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 PLA2G2AP14555 144 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 MSH3P20585 1137 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 PBLDP30039 288 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 SEPHS1P49903 392 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 KIF5AQ12840 1032 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 TBR1Q16650 682 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 DENND5AQ6IQ26 1287 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 TIPARPQ7Z3E1 657 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 RBM12BQ8IXT5 1001 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 OR13C4Q8NGS5 318 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 ARHGAP9Q9BRR9 750 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 ZPBPQ9BS86 351 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 SLC12A9Q9BXP2 914 aa20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 SIDT1Q9NXL6 827 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-215ENST00000580784 CRTAMO95727 393 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 FTCDO95954 541 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 PTMAP06454 111 aaKnown RBP20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 TMPRSS15P98073 1019 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 XIAPP98170 497 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 RPE65Q16518 533 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 LONRF2Q1L5Z9 754 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 NLGN4XQ8N0W4 816 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 UBL4BQ8N7F7 174 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 NLGN4YQ8NFZ3 816 aaPredicted RBP20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 GPR150Q8NGU9 434 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 TBL1YQ9BQ87 522 aa20.86■□□□□ 0.93
CSNK1D-215ENST00000580784 B8ZZF3 427 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 TOX3O15405 576 aaPredicted RBP20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 DDX3YO15523 660 aaKnown RBP20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 RASSF9O75901 435 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 STK17BO94768 372 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 CAPZBP47756 277 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 SH3BP2P78314 561 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 FOXM1Q08050 763 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 METRNLQ641Q3 311 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 FAM92BQ6ZTR7 304 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 SYCE1Q8N0S2 351 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 FAM71DQ8N9W8 422 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 SPC24Q8NBT2 197 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 RNF31Q96EP0 1072 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 ZNF514Q96K75 400 aaPredicted RBP20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 FAM96AQ9H5X1 160 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 ARNT2Q9HBZ2 717 aa20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 TMEM184BQ9Y519 407 aaPredicted RBP20.85■□□□□ 0.93
CSNK1D-215ENST00000580784 LOC101059948A0A1B0GTJ6 334 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 TCRBV7S2A1N4TA0A589 114 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 GOLGA6L9A6NEM1 432 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 MGAT4DA6NG13 374 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 AGAP14A8MT82 685 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms