RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FLNAP21333 2647 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 ANKRD12Q6UB98 2062 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 FOXN3O00409 490 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 CREB3O43889 395 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 SOCS5O75159 536 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 F13A1P00488 732 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 PDHA1P08559 390 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 CD46P15529 392 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 ZNF8P17098 575 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 SDC4P31431 198 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 PTPN9P43378 593 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 IST1P53990 364 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 HSD11B2P80365 405 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 LTBQ06643 244 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 SLC10A7Q0GE19 358 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 FOXD4Q12950 439 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 SEPT7Q16181 437 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 ASIC2Q16515 512 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 ZNF648Q5T619 568 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 TTI2Q6NXR4 508 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 FBXO38Q6PIJ6 1188 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 FAM180AQ6UWF9 173 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 PPP1R32Q7Z5V6 425 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 SLFN11Q7Z7L1 901 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 KMT5CQ86Y97 462 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 PHYKPLQ8IUZ5 450 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 TRIM48Q8IWZ4 208 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 BCORP1Q8N888 145 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 CATSPER1Q8NEC5 780 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 CHTF18Q8WVB6 975 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 CPT1BQ92523 772 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 NRGNQ92686 78 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 PPM1MQ96MI6 270 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 PSKH2Q96QS6 385 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 OSGEPL1Q9H4B0 414 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 NOD2Q9HC29 1040 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 ARFGAP3Q9NP61 516 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 SIX2Q9NPC8 291 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 FAM207AQ9NSI2 230 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 POT1Q9NUX5 634 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 P4HTMQ9NXG6 502 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 ATXN10Q9UBB4 475 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 APEX2Q9UBZ4 518 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 VPS13CQ709C8 3753 aa7.49□□□□□ -1.21
SMARCE1-217ENST00000580654 A0A1W2PQ67 120 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 TLCD2A6NGC4 264 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 SEC16AO15027 2179 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 LDB2O43679 373 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 KLHL41O60662 606 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CNOT3O75175 753 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 ALOX12BO75342 701 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 WISP2O76076 250 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 ZNF202O95125 648 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 PGLSO95336 258 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 PEX11BO96011 259 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 PYGLP06737 847 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 ZSCAN22P10073 491 aaPredicted RBP7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 AGAP20933 346 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 RPL10P27635 214 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 DNAJA1P31689 397 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 HADHAP40939 763 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 STC1P52823 247 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 NOMO3P69849 1222 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CSNK1G2P78368 415 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 PKP1Q13835 747 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 SSPNQ14714 243 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 ATL3Q6DD88 541 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 FCRL6Q6DN72 434 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 RPUSD3Q6P087 351 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 ABRAXAS1Q6UWZ7 409 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 GFRALQ6UXV0 394 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 TAOK1Q7L7X3 1001 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 FAM71AQ8IYT1 594 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 NPWQ8N729 165 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 GPR150Q8NGU9 434 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 OR8K5Q8NH50 307 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 OR1L3Q8NH93 324 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CPA5Q8WXQ8 436 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 NR4A3Q92570 626 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CLIP3Q96DZ5 547 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CNDP1Q96KN2 507 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 IP6K3Q96PC2 410 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 NUDCD1Q96RS6 583 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 FOXC2Q99958 501 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CARD9Q9H257 536 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CATSPERBQ9H7T0 1116 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 DTLQ9NZJ0 730 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 TNFRSF10DQ9UBN6 386 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 SH3BGRL2Q9UJC5 107 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 CFAP45Q9UL16 551 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 FZD10Q9ULW2 581 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 DNAJC16Q9Y2G8 782 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 WDR37Q9Y2I8 494 aa7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMARCE1-217ENST00000580654 ARHGAP42A6NI28 874 aa7.47□□□□□ -1.21
SMARCE1-217ENST00000580654 PDZK1P1A8MUH7 402 aa7.47□□□□□ -1.21
SMARCE1-217ENST00000580654 CHUKO15111 745 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms