RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 DPH5Q9H2P9 285 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 CARS2Q9HA77 564 aaKnown RBP9.75□□□□□ -0.85
GGA3-209ENST00000580646 UGT1A7Q9HAW7 530 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 UGT1A10Q9HAW8 530 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 UGT1A8Q9HAW9 530 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 CYP4F12Q9HCS2 524 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 MRPL40Q9NQ50 206 aaKnown RBP9.75□□□□□ -0.85
GGA3-209ENST00000580646 ZDHHC3Q9NYG2 299 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 ATXN10Q9UBB4 475 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 GULP1Q9UBP9 304 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 SLC2A6Q9UGQ3 507 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 PADI4Q9UM07 663 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 SUFUQ9UMX1 484 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 GPSM3Q9Y4H4 160 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 TEX264Q9Y6I9 313 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 RPS6KL1Q9Y6S9 549 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 FAM169AQ9Y6X4 670 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 DMXL2Q8TDJ6 3036 aa9.75□□□□□ -0.85
GGA3-209ENST00000580646 URB1O60287 2271 aaKnown RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 ZCWPW2A0A1B0GU75 182 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 KMOO15229 486 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 GRID2O43424 1007 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 CSO75390 466 aaKnown RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 CDK14O94921 469 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 AP2A2O94973 939 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 ASMTLO95671 621 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 GOT2P00505 430 aaKnown RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 FUCA1P04066 466 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 GSTM1P09488 218 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 ZNF8P17098 575 aaPredicted RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 MSH3P20585 1137 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 OGNP20774 298 aaKnown RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 ARNTP27540 789 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 NSG1P42857 185 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 TTPAP49638 278 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 MRPS25P82663 173 aaKnown RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 GSTM4Q03013 218 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 TYSND1Q2T9J0 566 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 ANKRD20A4Q4UJ75 823 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 BCL7AQ4VC05 210 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 MSS51Q4VC12 460 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 FASTKD1Q53R41 847 aaKnown RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 ZRANB3Q5FWF4 1079 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 SPANXN3Q5MJ09 141 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 PERM1Q5SV97 790 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 STEAP4Q687X5 459 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 MRNIPQ6NTE8 343 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 C19orf48Q6RUI8 117 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 ZDHHC24Q6UX98 284 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 CENPUQ71F23 418 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 TAF8Q7Z7C8 310 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 TRIM74Q86UV6 250 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 LRRTM4Q86VH4 590 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 SERPINA9Q86WD7 417 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 OR6P1Q8NGX9 317 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 GABPB2Q8TAK5 448 aaPredicted RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 GDAP1Q8TB36 358 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 FBXO25Q8TCJ0 367 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 ZNF669Q96BR6 464 aaPredicted RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 LINC00615Q96LM1 132 aaPredicted RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 TTC25Q96NG3 672 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 OR2M4Q96R27 311 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 TCF12Q99081 682 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 TIMM29Q9BSF4 260 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 GSDMCQ9BYG8 508 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 OR2AG1Q9H205 316 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 SUDS3Q9H7L9 328 aaPredicted RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 CATSPERZQ9NTU4 200 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 SIRPGQ9P1W8 387 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 DMGDHQ9UI17 866 aaKnown RBP9.74□□□□□ -0.85
GGA3-209ENST00000580646 MOSPD1Q9UJG1 213 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 TMEM98Q9Y2Y6 226 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 PCDHB1Q9Y5F3 818 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 FREM2Q5SZK8 3169 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 LAMA5O15230 3695 aa9.74□□□□□ -0.85
GGA3-209ENST00000580646 NBEAQ8NFP9 2946 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 CCDC78A2IDD5 438 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 PRR19A6NJB7 356 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 F8W8V4 182 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 CCL22O00626 93 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 PFDN6O15212 129 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 CD3EAPO15446 510 aaKnown RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 GPR39O43194 453 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 BRINP1O60477 761 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 GSTA2P09210 222 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ATP1B2P14415 290 aaPredicted RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 CALRP27797 417 aaKnown RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 CA5AP35218 305 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ELK3P41970 407 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 GNPDA1P46926 289 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 POLD2P49005 469 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 PRLHRP49683 370 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 PLTPP55058 493 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ADARP55265 1226 aaKnown RBP9.73□□□□□ -0.85
GGA3-209ENST00000580646 B4GALNT1Q00973 533 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 SLC7A5Q01650 507 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 GUCY2DQ02846 1103 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 DMPKQ09013 629 aa9.73□□□□□ -0.85
GGA3-209ENST00000580646 ILF3Q12906 894 aaKnown RBP eCLIP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms