RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ELK3P41970 407 aa21.32■■□□□ 1
CDC42EP4-203ENST00000578516 INSM1Q01101 510 aaPredicted RBP21.32■■□□□ 1
CDC42EP4-203ENST00000578516 C8orf74Q6P047 294 aa21.32■■□□□ 1
CDC42EP4-203ENST00000578516 DUS1LQ6P1R4 473 aaKnown RBP21.32■■□□□ 1
CDC42EP4-203ENST00000578516 AMZ2Q86W34 360 aa21.32■■□□□ 1
CDC42EP4-203ENST00000578516 GLMNQ92990 594 aa21.32■■□□□ 1
CDC42EP4-203ENST00000578516 OR52A4PA6NMU1 304 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 IQCF5A8MTL0 148 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 CFAP99D6REC4 459 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 RALBP11234 206 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 F3P13726 295 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 ITIH4Q14624 930 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 CRYMQ14894 314 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 CLCA4Q14CN2 919 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 HIF1AQ16665 826 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 ZNF789Q5FWF6 425 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 HES3Q5TGS1 186 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 ZDHHC24Q6UX98 284 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 MAATS1Q7Z4T9 603 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 TMEM135Q86UB9 458 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 KRT222Q8N1A0 295 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 SPDYE1Q8NFV5 336 aaPredicted RBP21.31■■□□□ 1
CDC42EP4-203ENST00000578516 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.31■■□□□ 1
CDC42EP4-203ENST00000578516 CARD6Q9BX69 1037 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 LRIT1Q9P2V4 623 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 PCDHGA1Q9Y5H4 931 aa21.31■■□□□ 1
CDC42EP4-203ENST00000578516 CFAP20Q9Y6A4 193 aaKnown RBP21.31■■□□□ 1
CDC42EP4-203ENST00000578516 OPA1O60313 960 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 POLBP06746 335 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 PREPP48147 710 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 RPIAP49247 311 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 DUSP3P51452 185 aaPredicted RBP21.3■■□□□ 1
CDC42EP4-203ENST00000578516 CLCNKAP51800 687 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 CCL7P80098 99 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 BRD3Q15059 726 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 ZNF658BQ4V348 819 aaPredicted RBP21.3■■□□□ 1
CDC42EP4-203ENST00000578516 DNAJC21Q5F1R6 531 aaKnown RBP21.3■■□□□ 1
CDC42EP4-203ENST00000578516 IYDQ6PHW0 289 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 PACS1Q6VY07 963 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 ERMP1Q7Z2K6 904 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 DENND6AQ8IWF6 608 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 SFRP1Q8N474 314 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 GPR150Q8NGU9 434 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 MAPK15Q8TD08 544 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 JPH3Q8WXH2 748 aaPredicted RBP21.3■■□□□ 1
CDC42EP4-203ENST00000578516 EBNA1BP2Q99848 306 aaKnown RBP21.3■■□□□ 1
CDC42EP4-203ENST00000578516 WWP1Q9H0M0 922 aa21.3■■□□□ 1
CDC42EP4-203ENST00000578516 ZNF624Q9P2J8 865 aaPredicted RBP21.3■■□□□ 1
CDC42EP4-203ENST00000578516 ATXN7L1Q9ULK2 861 aaPredicted RBP21.3■■□□□ 1
CDC42EP4-203ENST00000578516 A0A1W2PQM1 296 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 MGAT4DA6NG13 374 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 USP1O94782 785 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 TUBB4AP04350 444 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 PGAM1P18669 254 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 CSE1LP55060 971 aaKnown RBP21.29■■□□□ 1
CDC42EP4-203ENST00000578516 OR1D5P58170 312 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 DMPKQ09013 629 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 PDIA2Q13087 525 aaKnown RBP21.29■■□□□ 1
CDC42EP4-203ENST00000578516 ZNF470Q6ECI4 717 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 CAPN12Q6ZSI9 719 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 CENPUQ71F23 418 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 NAT6Q93015 286 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 SGSM3Q96HU1 749 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 RMDN2Q96LZ7 410 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 SCNM1Q9BWG6 230 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 COG4Q9H9E3 785 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 C20orf96Q9NUD7 363 aaPredicted RBP21.29■■□□□ 1
CDC42EP4-203ENST00000578516 WHRNQ9P202 907 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 TEX264Q9Y6I9 313 aa21.29■■□□□ 1
CDC42EP4-203ENST00000578516 UBA6A0AVT1 1052 aaPredicted RBP21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CTAGE15A4D2H0 777 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 AGRPO00253 132 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 RPLP0P05388 317 aaKnown RBP21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CTAGE8P0CG41 777 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 ERVK-10P10266 1014 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 GLB1P16278 677 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 SLC19A1P41440 591 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 NSG1P42857 185 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 ABCG1P45844 678 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 EIF3BP55884 814 aaKnown RBP21.28■■□□□ 1
CDC42EP4-203ENST00000578516 ARL4CP56559 192 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 MPP1Q00013 466 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CTBP1Q13363 440 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 TYSND1Q2T9J0 566 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CTSL3PQ5NE16 218 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 NEPROQ6NW34 567 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 TRMT10BQ6PF06 316 aaKnown RBP21.28■■□□□ 1
CDC42EP4-203ENST00000578516 UNC5AQ6ZN44 842 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 TMPRSS9Q7Z410 1059 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 SPRED1Q7Z699 444 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CTAGE6Q86UF2 777 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CCNJLQ8IV13 435 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CTAGE4Q8IX94 777 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 CFAP206Q8IYR0 622 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 PDIK1LQ8N165 341 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 MMGT1Q8N4V1 131 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.28■■□□□ 1
CDC42EP4-203ENST00000578516 OR2L2Q8NH16 312 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 FAM136AQ96C01 138 aa21.28■■□□□ 1
CDC42EP4-203ENST00000578516 FBXO6Q9NRD1 293 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms