RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ZNF358Q9NW07 568 aa9.96□□□□□ -0.82
CRLF3-202ENST00000577725 FBXL12Q9NXK8 326 aa9.96□□□□□ -0.82
CRLF3-202ENST00000577725 SENP1Q9P0U3 644 aa9.96□□□□□ -0.82
CRLF3-202ENST00000577725 IL17BQ9UHF5 180 aa9.96□□□□□ -0.82
CRLF3-202ENST00000577725 TMPRSS11EQ9UL52 423 aa9.96□□□□□ -0.82
CRLF3-202ENST00000577725 MMP17Q9ULZ9 603 aa9.96□□□□□ -0.82
CRLF3-202ENST00000577725 PRSS21Q9Y6M0 314 aa9.96□□□□□ -0.82
CRLF3-202ENST00000577725 PCNX2A6NKB5 2137 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 A0A096LPK6 155 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 IGLON5A6NGN9 336 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 FAM47DPA6NHR8 397 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 COPEO14579 308 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 PRPF4O43172 522 aaKnown RBP eCLIP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 MTX2O75431 263 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 PCDH8O95206 1070 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 DNTTP04053 509 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 C2P06681 752 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 ITGB6P18564 788 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 NDUFV2P19404 249 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 ACRV1P26436 265 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 RIPPLY3P57055 190 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 WDR4P57081 412 aaKnown RBP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 TIAL1Q01085 375 aaKnown RBP eCLIP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 FBXO43Q4G163 708 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 CTSL3PQ5NE16 218 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 PEAR1Q5VY43 1037 aaPredicted RBP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 SEL1L3Q68CR1 1132 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 RAPH1Q70E73 1250 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 GALNT7Q86SF2 657 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 TAX1BP1Q86VP1 789 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 LMNTD2Q8IXW0 634 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 PLD6Q8N2A8 252 aaKnown RBP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 NXPE1Q8N323 547 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 SPATA6LQ8N4H0 392 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 LKAAEAR1Q8TD35 194 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 TCP10LQ8TDR4 215 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 KCTD4Q8WVF5 259 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 HMGB4Q8WW32 186 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 ISL2Q96A47 359 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 DTD2Q96FN9 168 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 SIPA1Q96FS4 1042 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 PKNOX2Q96KN3 472 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 AARSD1Q9BTE6 412 aaKnown RBP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 REPIN1Q9BWE0 567 aaKnown RBP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 FSCN3Q9NQT6 498 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 INTS10Q9NVR2 710 aaKnown RBP9.95□□□□□ -0.82
CRLF3-202ENST00000577725 NKIRAS1Q9NYS0 192 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 ANKMY1Q9P2S6 941 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 GALPQ9UBC7 116 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 APPL1Q9UKG1 709 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 PIKFYVEQ9Y2I7 2098 aa9.95□□□□□ -0.82
CRLF3-202ENST00000577725 EML5Q05BV3 1969 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 TRBV5-4A0A0C4DH59 114 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 WDR91A4D1P6 747 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 IQCF5A8MTL0 148 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 FADS2P1A8MWK0 482 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 K7ESM1 405 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 WNT9AO14904 365 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 INPP4BO15327 924 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 NIPSNAP2O75323 286 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 RECQL5O94762 991 aaPredicted RBP9.94□□□□□ -0.82
CRLF3-202ENST00000577725 MPOP05164 745 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 GABRG2P18507 467 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 FDXRP22570 491 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 PTGER3P43115 390 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 TTPAP49638 278 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 SLC12A2P55011 1212 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 RAB10P61026 200 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 GNGT1P63211 74 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 POU4F1Q01851 419 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 DLG1Q12959 904 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 DNAJC3Q13217 504 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 DUOXA1Q1HG43 343 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 ZNF284Q2VY69 593 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 KHDC1Q4VXA5 237 aaKnown RBP9.94□□□□□ -0.82
CRLF3-202ENST00000577725 AARS2Q5JTZ9 985 aaKnown RBP9.94□□□□□ -0.82
CRLF3-202ENST00000577725 HENMT1Q5T8I9 393 aaKnown RBP9.94□□□□□ -0.82
CRLF3-202ENST00000577725 FAM45BPQ6NSW5 357 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 ARMCX6Q7L4S7 300 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 DET1Q7L5Y6 550 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 TRIM74Q86UV6 250 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 ARFGAP2Q8N6H7 521 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 TSTD1Q8NFU3 115 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 OR14C36Q8NHC7 312 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 FAM45AQ8TCE6 357 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 DENND1AQ8TEH3 1009 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 RAB7BQ96AH8 199 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 AP2M1Q96CW1 435 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 NUS1Q96E22 293 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 SGSM3Q96HU1 749 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 MRGPRX1Q96LB2 322 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 BIRC8Q96P09 236 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 PLEKHG4BQ96PX9 1271 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 FAM111AQ96PZ2 611 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 SLC30A3Q99726 388 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 SEMA4CQ9C0C4 833 aa9.94□□□□□ -0.82
CRLF3-202ENST00000577725 CNOT10Q9H9A5 744 aaKnown RBP9.94□□□□□ -0.82
CRLF3-202ENST00000577725 SARS2Q9NP81 518 aaKnown RBP9.94□□□□□ -0.82
CRLF3-202ENST00000577725 TSR3Q9UJK0 312 aaKnown RBP9.94□□□□□ -0.82
CRLF3-202ENST00000577725 PILRBQ9UKJ0 227 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms