RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 D2HGDHQ8N465 521 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TRAM1L1Q8N609 369 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TMEM102Q8N9M5 508 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 GLIS1Q8NBF1 620 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 BTBD6Q96KE9 485 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TIMM29Q9BSF4 260 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TUBB2BQ9BVA1 445 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 NUP85Q9BW27 656 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 HAUS4Q9H6D7 363 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 HRASLS2Q9NWW9 162 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 G3BP2Q9UN86 482 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 PSMD13Q9UNM6 376 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 PCSK5Q92824 1860 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 PIKFYVEQ9Y2I7 2098 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 CROCCQ5TZA2 2017 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 LGALS16A8MUM7 142 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 GPR89AB7ZAQ6 455 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 MASP2O00187 686 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 DDX3XO00571 662 aaKnown RBP eCLIP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 RAB40ALP0C0E4 278 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 GPR89BP0CG08 455 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 BPIP17213 487 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 CA4P22748 312 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 CCNCP24863 283 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 GRNP28799 593 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 GLRBP48167 497 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 ATP1A4Q13733 1029 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 RPE65Q16518 533 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 IFI16Q16666 785 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 KYNUQ16719 465 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 CRB2Q5IJ48 1285 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 DNTTIP2Q5QJE6 756 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 HGSNATQ68CP4 663 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 NCBP2-AS2Q69YL0 99 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 TIGD7Q6NT04 549 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 PPP1R2P3Q6NXS1 205 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 HPS6Q86YV9 775 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 DSELQ8IZU8 1212 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 INPP5DQ92835 1189 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 CLIP3Q96DZ5 547 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 ERGIC2Q96RQ1 377 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 ZSCAN5AQ9BUG6 496 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 NLNQ9BYT8 704 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 UNKQ9C0B0 810 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 ZBTB20Q9HC78 741 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 BPIFA1Q9NP55 256 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 LIMA1Q9UHB6 759 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 B3GNT3Q9Y2A9 372 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 NTNG1Q9Y2I2 539 aa9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 COPG1Q9Y678 874 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 CFAP20Q9Y6A4 193 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-220ENST00000576940 DIDO1Q9BTC0 2240 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 OTOGQ6ZRI0 2925 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 OR5K3A6NET4 321 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 LRRC10BA6NIK2 292 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 AURKAO14965 403 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 LRRTM2O43300 516 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 VEGFDO43915 354 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 POP7O75817 140 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 GZMAP12544 262 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 RORAP35398 523 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 HALP42357 657 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 ARCN1P48444 511 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 RIPPLY3P57055 190 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 GSDMDP57764 484 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 SLC25A11Q02978 314 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 SLC10A2Q12908 348 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 ABRQ12979 859 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 PAFAH1B3Q15102 231 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 PLCL1Q15111 1095 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 PTCHD3Q3KNS1 767 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 ATP13A5Q4VNC0 1218 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 KLHL35Q6PF15 583 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 FAM83HQ6ZRV2 1179 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 KMT5CQ86Y97 462 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 TRAPPC5Q8IUR0 188 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 SLC34A3Q8N130 599 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 CNTD1Q8N815 330 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 GDAP1Q8TB36 358 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 TEKT4Q8WW24 435 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 SGSM3Q96HU1 749 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 LRFN5Q96NI6 719 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 TSGA13Q96PP4 275 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 INSM2Q96T92 566 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 TLR10Q9BXR5 811 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 ADGRE3Q9BY15 652 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 GPR63Q9BZJ6 419 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 NUP62CLQ9H1M0 184 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 MRPL47Q9HD33 250 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 PCMTD2Q9NV79 361 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 C5AR2Q9P296 337 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 AMACRQ9UHK6 382 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 SCINQ9Y6U3 715 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 C2CD3Q4AC94 2353 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 SEC16AO15027 2179 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 AKAP9Q99996 3911 aa9.87□□□□□ -0.83
NPLOC4-220ENST00000576940 POLEQ07864 2286 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 APCP25054 2843 aa9.86□□□□□ -0.83
NPLOC4-220ENST00000576940 OR6C74A6NCV1 312 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms