RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FNIP1Q8TF40 1166 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 JPH3Q8WXH2 748 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 USP7Q93009 1102 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 GRAMD1AQ96CP6 724 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 NUS1Q96E22 293 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 LIN37Q96GY3 246 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PTCHD1Q96NR3 888 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 CSPG4P5Q96PW8 444 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 NUDCD1Q96RS6 583 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 THAP2Q9H0W7 228 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 ISCUQ9H1K1 167 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 WDR26Q9H7D7 661 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PCDH18Q9HCL0 1135 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 NT5MQ9NPB1 228 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.2□□□□□ -1.42
NUP88-212ENST00000576708 GOLGA6AQ9NYA3 693 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 FOXJ2Q9P0K8 574 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 TMEM98Q9Y2Y6 226 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 MGAQ8IWI9 3026 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 A0A1W2PQC6 194 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 SMTNL1A8MU46 457 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 FADS2P1A8MWK0 482 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 EIF3CLB5ME19 914 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 GOLGA6L22H0YM25 854 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 PRODHO43272 600 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 MFSD11O43934 449 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 PGLSO95336 258 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 MBD3O95983 291 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 SOD1P00441 154 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 THBDP07204 575 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 HOXC4P09017 264 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 FAM153BP0C7A2 387 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 JMJD7P0C870 316 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 MYCLP1P12525 358 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 CCL4P13236 92 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 CCNB1P14635 433 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 KELP23276 732 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 IL4RP24394 825 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 ALDH4A1P30038 563 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 CCKBRP32239 447 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 PCK1P35558 622 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 GJC1P36383 396 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 ARL4AP40617 200 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 SSR1P43307 286 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 MMP13P45452 471 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 RENBPP51606 427 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 POLR2LP62875 67 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 CYP4F2P78329 520 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 ZFP36L1Q07352 338 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 LAPTM5Q13571 262 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 ARHGEF7Q14155 803 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 IQCB1Q15051 598 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 SLC14A2Q15849 920 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 DPYSL2Q16555 572 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 LINC00303Q3SY05 128 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 FILIP1LQ4L180 1135 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 NKAIN2Q5VXU1 208 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 RAET1GQ6H3X3 334 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 PPP1R2P3Q6NXS1 205 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 CAVIN1Q6NZI2 390 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 MARK2Q7KZI7 788 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 ZNF761Q86XN6 746 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 PSTKQ8IV42 348 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 LILRB2Q8N423 598 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 LZTR1Q8N653 840 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 EXD3Q8N9H8 876 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 RCBTB1Q8NDN9 531 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 SNRNP27Q8WVK2 155 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 PIH1D2Q8WWB5 315 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 SCAMP4Q969E2 229 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 DTD2Q96FN9 168 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 CCDC120Q96HB5 630 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 ZNF599Q96NL3 588 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 CCNL2Q96S94 520 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 AGAP2Q99490 1192 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 EIF3CQ99613 913 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 SEMA3CQ99985 751 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 MGME1Q9BQP7 344 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 BPIFA3Q9BQP9 254 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 NUDT22Q9BRQ3 303 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 AARSD1Q9BTE6 412 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 TEX101Q9BY14 249 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 FRMD8Q9BZ67 464 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 STRADBQ9C0K7 418 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 NAT10Q9H0A0 1025 aaKnown RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 ABCG8Q9H221 673 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 PHPT1Q9NRX4 125 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 DONSONQ9NYP3 566 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 TAAR2Q9P1P5 351 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 APPL1Q9UKG1 709 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 SUFUQ9UMX1 484 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 PRKAB1Q9Y478 270 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 PCYT1BQ9Y5K3 369 aaPredicted RBP6.19□□□□□ -1.42
NUP88-212ENST00000576708 SCINQ9Y6U3 715 aa6.19□□□□□ -1.42
NUP88-212ENST00000576708 ATMQ13315 3056 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 A0A087X0T9 212 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 RHPN2P1A8MT19 583 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 TMX2-CTNND1H3BSU7 103 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms