RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SPATA31D3P0C874 917 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 ZBTB48P10074 688 aaPredicted RBP17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 RHOQP17081 205 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 CYP4F8P98187 520 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 HECTD3Q5T447 861 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 INTS11Q5TA45 600 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 DOK6Q6PKX4 331 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 SPATA31D4Q6ZUB0 917 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 CDKN2AIPNLQ96HQ2 116 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 PDLIM7Q9NR12 457 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 PMF1-BGLAPU3KQ54 211 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 OR10H3O60404 316 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 C1QTNF8P60827 252 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 PAFAH1B3Q15102 231 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 R3HCC1LQ7Z5L2 792 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 TMEM135Q86UB9 458 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 LEMD2Q8NC56 503 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 GMLQ99445 158 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 DHRS4Q9BTZ2 278 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 SATB2Q9UPW6 733 aa17.68■□□□□ 0.42
ATPAF1-214ENST00000576409 A0A0J9YVX5 310 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 B4GAT1O43505 415 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 GNAO1P09471 354 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 FEN1P39748 380 aaKnown RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 SOX4Q06945 474 aaPredicted RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 GTF2H2Q13888 395 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 PIGGQ5H8A4 983 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 SIRPB2Q5JXA9 342 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 GTF2H2CQ6P1K8 395 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 CYP20A1Q6UW02 462 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 PTCD2Q8WV60 388 aaKnown RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 GTPBP3Q969Y2 492 aaKnown RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 ITCHQ96J02 903 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 UBAP1Q9NZ09 502 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 DNMT3LQ9UJW3 386 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 G3V2L1 256 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 G6PDP11413 515 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 ZNF12P17014 697 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 KPNA1P52294 538 aaPredicted RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 RAB39AQ14964 217 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 TGFBIQ15582 683 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 ZSWIM7Q19AV6 140 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 ATXN7L2Q5T6C5 722 aaPredicted RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 C14orf80Q86SX3 495 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 SLC15A3Q8IY34 581 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 TTC29Q8NA56 475 aaPredicted RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 CGREF1Q99674 301 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 TOR3AQ9H497 397 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 CROCCQ5TZA2 2017 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 RAP2AP10114 183 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 COPZ1P61923 177 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 NIPAL4Q0D2K0 466 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 TP53BP2Q13625 1128 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 ANGPT1Q15389 498 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 UBE2R2Q712K3 238 aaPredicted RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 EIF3MQ7L2H7 374 aaKnown RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 MTERF1Q99551 399 aaKnown RBP17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 KCNS3Q9BQ31 491 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 CRTAC1Q9NQ79 661 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 ACTR3BQ9P1U1 418 aa17.67■□□□□ 0.42
ATPAF1-214ENST00000576409 GRID2O43424 1007 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 PRAMEF1O95521 474 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 TFAP2AP05549 437 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 UMPSP11172 480 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 MYL12AP19105 171 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 RPL9P32969 192 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 OR1D2P34982 312 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 SLC26A3P40879 764 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 CLDN10P78369 228 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 MYBPC1Q00872 1141 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 GPRIN1Q7Z2K8 1008 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 AADATQ8N5Z0 425 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 ARNTL2Q8WYA1 636 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 COPS8Q99627 209 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 WDR83Q9BRX9 315 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 MTRRQ9UBK8 725 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 GNPTGQ9UJJ9 305 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 PSME2Q9UL46 239 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 PPP6CO00743 305 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 FAM189A1O60320 539 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 LRG1P02750 347 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 CDC42P60953 191 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 NPTX1Q15818 432 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 HID1Q8IV36 788 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 BRSK1Q8TDC3 778 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 NTAN1Q96AB6 310 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 PRRG3Q9BZD7 231 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 TNKS2Q9H2K2 1166 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 TRIM45Q9H8W5 580 aaPredicted RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 INTS7Q9NVH2 962 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 MICAL3Q7RTP6 2002 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 XYLBO75191 536 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 CD36P16671 472 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 RPL17P18621 184 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 RPIAP49247 311 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 VBP1P61758 197 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 PDE12Q6L8Q7 609 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 UGT2A3Q6UWM9 527 aa17.66■□□□□ 0.42
ATPAF1-214ENST00000576409 ZNF598Q86UK7 904 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms