RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CHMP2BQ9UQN3 213 aa7.79□□□□□ -1.16
CCDC40-215ENST00000576033 WDR37Q9Y2I8 494 aa7.79□□□□□ -1.16
CCDC40-215ENST00000576033 PCDHGB2Q9Y5G2 931 aa7.79□□□□□ -1.16
CCDC40-215ENST00000576033 ZCWPW2A0A1B0GU75 182 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CPED1A4D0V7 1026 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 KRT87PA6NCN2 255 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 A6NCN8 305 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 PRR19A6NJB7 356 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 OR52A4PA6NMU1 304 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 AGAP14A8MT82 685 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 HMGB1P1B2RPK0 211 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 H7C0S8 307 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 TNFRSF10CO14798 259 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CHUKO15111 745 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 EIF3HO15372 352 aaKnown RBP eCLIP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 HYAL3O43820 417 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 FOXD2O60548 495 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 ABCB7O75027 752 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 TCEA3O75764 348 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CDK14O94921 469 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 VAPBO95292 243 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 LDOC1O95751 146 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 TTC4O95801 387 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 ANXA6P08133 673 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 BRAFP15056 766 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 ITGALP20701 1170 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CSRP1P21291 193 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 KELP23276 732 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 PSMA3P25788 255 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 RPL10P27635 214 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 ELK3P41970 407 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 PREPP48147 710 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 ARCN1P48444 511 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CSE1LP55060 971 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 MPP1Q00013 466 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 FOXC1Q12948 553 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 SLC14A1Q13336 389 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CRYMQ14894 314 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 INSCQ1MX18 579 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 PCID2Q5JVF3 399 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 AGBL2Q5U5Z8 902 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 TRMT10BQ6PF06 316 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 TMEM220Q6QAJ8 160 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 AFTPHQ6ULP2 937 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 DHRS13Q6UX07 377 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 EFL1Q7Z2Z2 1120 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 TMPRSS9Q7Z410 1059 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 PCGF5Q86SE9 256 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 LRRTM4Q86VH4 590 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 NLRP8Q86W28 1048 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 NAGSQ8N159 534 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 MCUQ8NE86 351 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 FAM46DQ8NEK8 389 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 SPDYE1Q8NFV5 336 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 FAM174AQ8TBP5 190 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 IFI44Q8TCB0 444 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 SLC37A2Q8TED4 501 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 ZDHHC1Q8WTX9 485 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CCDC74AQ96AQ1 378 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 TLCD1Q96CP7 247 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 KIFC1Q9BW19 673 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 IL22Q9GZX6 179 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CDH19Q9H159 772 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CDC42EP4Q9H3Q1 356 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 DPEP2Q9H4A9 486 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 SYNDIG1Q9H7V2 258 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CATSPERZQ9NTU4 200 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 PSD3Q9NYI0 1048 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 EURLQ9NYK6 297 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 VPS18Q9P253 973 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 GALPQ9UBC7 116 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 KLK13Q9UKR3 277 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 DOLKQ9UPQ8 538 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 CFAP20Q9Y6A4 193 aaKnown RBP7.78□□□□□ -1.16
CCDC40-215ENST00000576033 MAD1L1Q9Y6D9 718 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 SLC30A1Q9Y6M5 507 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 RNF215Q9Y6U7 377 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 IGF2RP11717 2491 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 KIF26BQ2KJY2 2108 aa7.78□□□□□ -1.16
CCDC40-215ENST00000576033 IGLV3-16A0A075B6K0 115 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 TOR1BO14657 336 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 YKT6O15498 198 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 DFNA5O60443 496 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 PYGLP06737 847 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ERVK-10P10266 1014 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ZNF7P17097 686 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 MSH3P20585 1137 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 HADHAP40939 763 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 SLC1A2P43004 574 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 NPY2RP49146 381 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 PRAMEP78395 509 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 DAB2P98082 770 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CDK16Q00536 496 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CACNG1Q06432 222 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ILF3Q12906 894 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CTBP1Q13363 440 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 ITGA9Q13797 1035 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 SLC29A2Q14542 456 aa7.77□□□□□ -1.17
CCDC40-215ENST00000576033 PUM1Q14671 1186 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC40-215ENST00000576033 CLCA4Q14CN2 919 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms