RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 NAXDQ8IW45 347 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 EID2Q8N6I1 236 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 C2CD4AQ8NCU7 369 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 FAM46DQ8NEK8 389 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 OR2L2Q8NH16 312 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 OR4C6Q8NH72 309 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 RHBDD1Q8TEB9 315 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 LPGAT1Q92604 370 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 CDKL2Q92772 493 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 LINC00615Q96LM1 132 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 TSSK1BQ9BXA7 367 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 P2RY12Q9H244 342 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 DPEP2Q9H4A9 486 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 OSGEPL1Q9H4B0 414 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 FBXO6Q9NRD1 293 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 TAAR2Q9P1P5 351 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 ZFATQ9P243 1243 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 SLC23A2Q9UGH3 650 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 PCDHB1Q9Y5F3 818 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 PRSS21Q9Y6M0 314 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 V9GYY5 206 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 LRP4O75096 1905 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 TCRBV9S1A1TA0A576 114 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 MGAT4DA6NG13 374 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 H3BMM5 538 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 SH3BP5O60239 455 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 S1PR4O95977 384 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 ESR1P03372 595 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 GSTM1P09488 218 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 GIMD1P0DJR0 217 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 FMO4P31512 558 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 PHBP35232 272 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 CLCNKAP51800 687 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 ADARP55265 1226 aaKnown RBP13.75□□□□□ -0.21
RPAIN-217ENST00000575711 MPP1Q00013 466 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 GSTM4Q03013 218 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 DMPKQ09013 629 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 KYNUQ16719 465 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 ERCC6LQ2NKX8 1250 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 C6orf132Q5T0Z8 1188 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 ZCCHC8Q6NZY4 707 aaKnown RBP13.75□□□□□ -0.21
RPAIN-217ENST00000575711 CYS1Q717R9 158 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 GSPT2Q8IYD1 628 aaKnown RBP13.75□□□□□ -0.21
RPAIN-217ENST00000575711 GLMNQ92990 594 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 PANX3Q96QZ0 392 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 CCM2Q9BSQ5 444 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 CDC42EP4Q9H3Q1 356 aaKnown RBP13.75□□□□□ -0.21
RPAIN-217ENST00000575711 RRAGDQ9NQL2 400 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-217ENST00000575711 NSMCE4AQ9NXX6 385 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 NINJ2Q9NZG7 142 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 BTBD3Q9Y2F9 522 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 CRYL1Q9Y2S2 319 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 ST14Q9Y5Y6 855 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 LAMA1P25391 3075 aa13.75□□□□□ -0.21
RPAIN-217ENST00000575711 C17orf113A0A1B0GUU1 675 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 B4DGG1 531 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 TRIM38O00635 465 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SLC30A4O14863 429 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SIGLEC6O43699 453 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SNX2O60749 519 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 F7P08709 466 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SDHBP21912 280 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 IDSP22304 550 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 MCM3P25205 808 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 LEPRP48357 1165 aaKnown RBP13.74□□□□□ -0.21
RPAIN-217ENST00000575711 NFE2L1Q14494 772 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 GALNT7Q86SF2 657 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SLC26A11Q86WA9 606 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 HM13Q8TCT9 377 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 FBF1Q8TES7 1133 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 ZDHHC1Q8WTX9 485 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SLC32A1Q9H598 525 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SPATS2LQ9NUQ6 558 aaKnown RBP13.74□□□□□ -0.21
RPAIN-217ENST00000575711 EVA1BQ9NVM1 165 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SIRPGQ9P1W8 387 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 SLC17A6Q9P2U8 582 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 FAM8A1Q9UBU6 413 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 FTSJ1Q9UET6 329 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 PCOLCE2Q9UKZ9 415 aa13.74□□□□□ -0.21
RPAIN-217ENST00000575711 EP300Q09472 2414 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-217ENST00000575711 PDZK1P1A8MUH7 402 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 HAUS5O94927 633 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 TRIM16O95361 564 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 ACSL3O95573 720 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 LDOC1O95751 146 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-217ENST00000575711 MYBL2P10244 700 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 PKMP14618 531 aaKnown RBP13.73□□□□□ -0.21
RPAIN-217ENST00000575711 SLC2A4P14672 509 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 ITGB6P18564 788 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 CD151P48509 253 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 RPIAP49247 311 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 VSNL1P62760 191 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 SEPT7Q16181 437 aaKnown RBP13.73□□□□□ -0.21
RPAIN-217ENST00000575711 SYTL3Q4VX76 610 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 ZNF789Q5FWF6 425 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 CTSL3PQ5NE16 218 aa13.73□□□□□ -0.21
RPAIN-217ENST00000575711 WDR93Q6P2C0 686 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms