RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 IL12RB1P42701 662 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 HSPA7P48741 367 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 SUOXP51687 545 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 STX5Q13190 355 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 ACAP2Q15057 778 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 RBM20Q5T481 1227 aaKnown RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 CXorf57Q6NSI4 855 aaKnown RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 FSTL5Q8N475 847 aaPredicted RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 ZNF655Q8N720 491 aaPredicted RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 PHC3Q8NDX5 983 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 NAT14Q8WUY8 206 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 JADE3Q92613 823 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 HIC2Q96JB3 615 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 ACSS2Q9NR19 701 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 TMEM216Q9P0N5 145 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 SLC12A4Q9UP95 1085 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 B2RBV5 119 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 CASQ2O14958 399 aaPredicted RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 IGLV3-25P01717 112 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 MRPS21P82921 87 aaKnown RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 MLF2Q15773 248 aaPredicted RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 PGS1Q32NB8 556 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 PRPF38BQ5VTL8 546 aaKnown RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 OTUD1Q5VV17 481 aaPredicted RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 C1orf146Q5VVC0 180 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 RLN3Q8WXF3 142 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 FGF14Q92915 247 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 ESAMQ96AP7 390 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 CCM2Q9BSQ5 444 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 SLC17A9Q9BYT1 436 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 DPY30Q9C005 99 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 FZD3Q9NPG1 666 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 DNAJC11Q9NVH1 559 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 SCML1Q9UN30 329 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 HS3ST2Q9Y278 367 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 PSAT1Q9Y617 370 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 CFAP20Q9Y6A4 193 aaKnown RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 A0A0U1RQS6 177 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 CCT8L1PA6NM43 557 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 B4DGG1 531 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 C5orf58C9J3I9 102 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 IVDP26440 423 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 ARSDP51689 593 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 NUMA1Q14980 2115 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 TAZQ16635 292 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 SPRED3Q2MJR0 410 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 AGKQ53H12 422 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 CRTC1Q6UUV9 634 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 TMPRSS11BQ86T26 416 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 TMC8Q8IU68 726 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 DCBLD1Q8N8Z6 715 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 PEX13Q92968 403 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 CATSPER2Q96P56 530 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 RHBGQ9H310 441 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 MRM3Q9HC36 420 aaKnown RBP9.98□□□□□ -0.81
SMG6-213ENST00000573166 GID8Q9NWU2 228 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 SIRPGQ9P1W8 387 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 COPG2Q9UBF2 871 aa9.98□□□□□ -0.81
SMG6-213ENST00000573166 A0A088AWK7 358 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 NEMP2A6NFY4 417 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 UBXN8O00124 270 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 BIRC5O15392 142 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 PEX11AO75192 247 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 UBOX5O94941 541 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 C8GP07360 202 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 BPGMP07738 259 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 ZNF10P21506 573 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 SPINT3P49223 89 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 PTPN5P54829 565 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 CDC16Q13042 620 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 PDK4Q16654 411 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 RERGQ96A58 199 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 AARSD1Q9BTE6 412 aaKnown RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 TRIM15Q9C019 465 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 TRIM45Q9H8W5 580 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 LGALS13Q9UHV8 139 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 CLEC4EQ9ULY5 219 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 SPO11Q9Y5K1 396 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 ATP6AP2A0A1C7CYW4 349 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 KMOO15229 486 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 FFAR2O15552 330 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 HOXC11O43248 304 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 PLIN3O60664 434 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 ATP6AP2O75787 350 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 CDH3P22223 829 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 ITGB7P26010 798 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 OXTRP30559 389 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 NAA20P61599 178 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 MAD2L1Q13257 205 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 MTDHQ86UE4 582 aaKnown RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 PIM3Q86V86 326 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 LCA5Q86VQ0 697 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 CYP4X1Q8N118 509 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 TCAIMQ8N3R3 496 aa9.97□□□□□ -0.81
SMG6-213ENST00000573166 ATXN2LQ8WWM7 1075 aaKnown RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 ZNF707Q96C28 371 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 MAGEB10Q96LZ2 347 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 FCRL3Q96P31 734 aaPredicted RBP9.97□□□□□ -0.81
SMG6-213ENST00000573166 THUMPD3Q9BV44 507 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms