RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 TAF4O00268 1085 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 CD3EAPO15446 510 aaKnown RBP17.81■□□□□ 0.44
PFN1-202ENST00000572383 CLCNKAP51800 687 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 MAZP56270 477 aaKnown RBP17.81■□□□□ 0.44
PFN1-202ENST00000572383 HLTFQ14527 1009 aaKnown RBP eCLIP17.81■□□□□ 0.44
PFN1-202ENST00000572383 ITIH4Q14624 930 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 BBS9Q3SYG4 887 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 BCL7AQ4VC05 210 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 PERM1Q5SV97 790 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 LYPLAL1Q5VWZ2 237 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 DUPD1Q68J44 220 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 KIAA0930Q6ICG6 404 aaPredicted RBP17.81■□□□□ 0.44
PFN1-202ENST00000572383 TMEM135Q86UB9 458 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 AMZ2Q86W34 360 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 C17orf82Q86X59 251 aaPredicted RBP17.81■□□□□ 0.44
PFN1-202ENST00000572383 STAMBPL1Q96FJ0 436 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 ZNF514Q96K75 400 aaPredicted RBP17.81■□□□□ 0.44
PFN1-202ENST00000572383 LRRC1Q9BTT6 524 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 CCDC86Q9H6F5 360 aaKnown RBP17.81■□□□□ 0.44
PFN1-202ENST00000572383 PRDM8Q9NQV8 689 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 EVA1BQ9NVM1 165 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 IL1RAPL1Q9NZN1 696 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 UTP11Q9Y3A2 253 aaKnown RBP17.81■□□□□ 0.44
PFN1-202ENST00000572383 PRSS21Q9Y6M0 314 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 FAM208BQ5VWN6 2430 aa17.81■□□□□ 0.44
PFN1-202ENST00000572383 ZCWPW2A0A1B0GU75 182 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 A6NCN8 305 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 OR1I1O60431 355 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 PAMP19021 973 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 ARCN1P48444 511 aaKnown RBP17.8■□□□□ 0.44
PFN1-202ENST00000572383 PRLHRP49683 370 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 SLC7A5Q01650 507 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 CAMK2BQ13554 666 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 SEPT7Q16181 437 aaKnown RBP17.8■□□□□ 0.44
PFN1-202ENST00000572383 HIF1AQ16665 826 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 DNAJC21Q5F1R6 531 aaKnown RBP17.8■□□□□ 0.44
PFN1-202ENST00000572383 HP1BP3Q5SSJ5 553 aaPredicted RBP17.8■□□□□ 0.44
PFN1-202ENST00000572383 C8orf74Q6P047 294 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 CERS6Q6ZMG9 384 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 FAM83HQ6ZRV2 1179 aaPredicted RBP17.8■□□□□ 0.44
PFN1-202ENST00000572383 PROSER1Q86XN7 944 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 MARCH9Q86YJ5 346 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 IGDCC3Q8IVU1 814 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 PDIK1LQ8N165 341 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 ARL14Q8N4G2 192 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 BBOF1Q8ND07 529 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 RAB17Q9H0T7 212 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 GRHL1Q9NZI5 618 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 WHRNQ9P202 907 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 DKK4Q9UBT3 224 aa17.8■□□□□ 0.44
PFN1-202ENST00000572383 DNMT3AQ9Y6K1 912 aaPredicted RBP17.8■□□□□ 0.44
PFN1-202ENST00000572383 COL27A1Q8IZC6 1860 aaPredicted RBP17.8■□□□□ 0.44
PFN1-202ENST00000572383 LAMA5O15230 3695 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 USP1O94782 785 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 F3P13726 295 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 VCLP18206 1134 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 RPL10P27635 214 aaKnown RBP17.79■□□□□ 0.44
PFN1-202ENST00000572383 NSG1P42857 185 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 DRG2P55039 364 aaKnown RBP17.79■□□□□ 0.44
PFN1-202ENST00000572383 DMPKQ09013 629 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 CALCOCO2Q13137 446 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 NFE2L1Q14494 772 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 TRADDQ15628 312 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 AARS2Q5JTZ9 985 aaKnown RBP17.79■□□□□ 0.44
PFN1-202ENST00000572383 PACS1Q6VY07 963 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 CACTIN-AS1Q8N1I8 211 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 MMGT1Q8N4V1 131 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 OTUD6BQ8N6M0 293 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 NOA1Q8NC60 698 aaKnown RBP17.79■□□□□ 0.44
PFN1-202ENST00000572383 MNS1Q8NEH6 495 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 OR2L2Q8NH16 312 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 CCDC74AQ96AQ1 378 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 LINC00615Q96LM1 132 aaPredicted RBP17.79■□□□□ 0.44
PFN1-202ENST00000572383 TTC1Q99614 292 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 EBNA1BP2Q99848 306 aaKnown RBP17.79■□□□□ 0.44
PFN1-202ENST00000572383 LRIT1Q9P2V4 623 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 FAM8A1Q9UBU6 413 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 RABGEF1Q9UJ41 708 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 RNF215Q9Y6U7 377 aa17.79■□□□□ 0.44
PFN1-202ENST00000572383 CTAGE15A4D2H0 777 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 FAM149AA5PLN7 773 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 TRABD2BA6NFA1 517 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 MGAT4DA6NG13 374 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 NDC80O14777 642 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 CASC3O15234 703 aaKnown RBP17.78■□□□□ 0.44
PFN1-202ENST00000572383 KCNJ13O60928 360 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 POLBP06746 335 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 GP1BAP07359 652 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 CTAGE8P0CG41 777 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 JUPP14923 745 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 GLB1P16278 677 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 PGAM1P18669 254 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 IDSP22304 550 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 ELK3P41970 407 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 ARL4CP56559 192 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 CLDN6P56747 220 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 E2F1Q01094 437 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 HES3Q5TGS1 186 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 IYDQ6PHW0 289 aa17.78■□□□□ 0.44
PFN1-202ENST00000572383 XKR5Q6UX68 686 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms