RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 ZNF490Q9ULM2 529 aaPredicted RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 MRPS23Q9Y3D9 190 aaKnown RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 ZNF711Q9Y462 761 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 KIF1CO43896 1103 aaKnown RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 ALDOCP09972 364 aaKnown RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 MSH3P20585 1137 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CD70P32970 193 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 PWP1Q13610 501 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 SF1Q15637 639 aaKnown RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CPSF7Q8N684 471 aaKnown RBP16.01■□□□□ 0.15
RAB40B-206ENST00000571995 SLC39A13Q96H72 371 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 GPR78Q96P69 363 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CLSTN3Q9BQT9 956 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 C1orf21Q9H246 121 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CLEC4EQ9ULY5 219 aa16.01■□□□□ 0.15
RAB40B-206ENST00000571995 CFAP99D6REC4 459 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 G6PDP11413 515 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 EPB42P16452 691 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 MAPKAPK3Q16644 382 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 FAM174BQ3ZCQ3 159 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 CACHD1Q5VU97 1274 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 SPESP1Q6UW49 350 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 LILRA2Q8N149 483 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 RNF175Q8N4F7 328 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 OR10A6Q8NH74 314 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 OAZ3Q9UMX2 235 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 TBC1D3BA6NDS4 549 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 ALBP02768 609 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 MMP2P08253 660 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 IST1P53990 364 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 IRX1P78414 480 aaPredicted RBP16■□□□□ 0.15
RAB40B-206ENST00000571995 CHRNB3Q05901 458 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 ZNF423Q2M1K9 1284 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 PABPC1LQ4VXU2 614 aaKnown RBP16■□□□□ 0.15
RAB40B-206ENST00000571995 UBE2R2Q712K3 238 aaPredicted RBP16■□□□□ 0.15
RAB40B-206ENST00000571995 PHACTR4Q8IZ21 702 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 KREMEN2Q8NCW0 462 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 CATSPER1Q8NEC5 780 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 FAM120BQ96EK7 910 aaKnown RBP16■□□□□ 0.15
RAB40B-206ENST00000571995 RMND5BQ96G75 393 aaPredicted RBP16■□□□□ 0.15
RAB40B-206ENST00000571995 C1orf74Q96LT6 269 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 SLC29A1Q99808 456 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 TLL1O43897 1013 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 RPIAP49247 311 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 DGKEP52429 567 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 POLR2JP52435 117 aaKnown RBP16■□□□□ 0.15
RAB40B-206ENST00000571995 CDKL1Q00532 357 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 ZNF284Q2VY69 593 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 FBXL19Q6PCT2 694 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 PSKH2Q96QS6 385 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 RHBDL2Q9NX52 303 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 INVSQ9Y283 1065 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 TRIOBPQ9H2D6 2365 aa16■□□□□ 0.15
RAB40B-206ENST00000571995 LSM3P62310 102 aaKnown RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 SNRPD1P62314 119 aaKnown RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 CYP4F2P78329 520 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 TGFBIQ15582 683 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 Q6ZVL8 140 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 RETREG3Q86VR2 466 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 OR4F6Q8NGB9 312 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 ITFG1Q8TB96 612 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 FOXJ1Q92949 421 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 TMEM159Q96B96 161 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 C6orf203Q9P0P8 240 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 IKZF3Q9UKT9 509 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 CNOT6Q9ULM6 557 aaKnown RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 SNX8Q9Y5X2 465 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 TRBV23OR9-2A0A075B6M9 112 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 DIRAS1O95057 198 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 POLR2EP19388 210 aaKnown RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 HOXD9P28356 352 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 DSC1Q08554 894 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 ANKRD26P1Q6NSI1 321 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 ZFP1Q6P2D0 407 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 SLAIN1Q8ND83 568 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 TSPAN14Q8NG11 270 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 PRICKLE1Q96MT3 831 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 CDK5RAP1Q96SZ6 601 aaKnown RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 DGCR6LQ9BY27 220 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 COQ6Q9Y2Z9 468 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 INSL5Q9Y5Q6 135 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 EI24O14681 340 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 NOBOXO60393 691 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 ATP5BP06576 529 aaKnown RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 SPIDRQ14159 915 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 TAF1AQ15573 450 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-206ENST00000571995 LPCAT2Q7L5N7 544 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 GALNT5Q7Z7M9 940 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 OR52E6Q96RD3 313 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 KIF17Q9P2E2 1029 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 UNC80Q8N2C7 3258 aa15.99■□□□□ 0.15
RAB40B-206ENST00000571995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.98■□□□□ 0.15
RAB40B-206ENST00000571995 UNCXA6NJT0 531 aa15.98■□□□□ 0.15
RAB40B-206ENST00000571995 GLUD1P00367 558 aa15.98■□□□□ 0.15
RAB40B-206ENST00000571995 LDLRP01130 860 aa15.98■□□□□ 0.15
RAB40B-206ENST00000571995 LRRC66Q68CR7 880 aa15.98■□□□□ 0.15
RAB40B-206ENST00000571995 USP45Q70EL2 814 aa15.98■□□□□ 0.15
RAB40B-206ENST00000571995 TMEM25Q86YD3 366 aa15.98■□□□□ 0.15
RAB40B-206ENST00000571995 FBXL20Q96IG2 436 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms