RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 RGSL1A5PLK6 1076 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 CXorf49A8MYA2 514 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-209ENST00000571558 H3BM21 787 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 TPP1O14773 563 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 ELFN1P0C7U0 828 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 PAMP19021 973 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 STX2P32856 288 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 HADHAP40939 763 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 TMPRSS15P98073 1019 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 CLN3Q13286 438 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 PEX6Q13608 980 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 ZNF284Q2VY69 593 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 COLEC12Q5KU26 742 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 PDPK2PQ6A1A2 396 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 Q6ZVL8 140 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 CNTN4Q8IWV2 1026 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 GPR26Q8NDV2 337 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 OR13H1Q8NG92 308 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 UHMK1Q8TAS1 419 aaKnown RBP13.59□□□□□ -0.23
RPAIN-209ENST00000571558 ATXN7L3BQ96GX2 97 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 PLEKHG4BQ96PX9 1271 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 GPR27Q9NS67 375 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 C20orf96Q9NUD7 363 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-209ENST00000571558 PCDHGA7Q9Y5G6 932 aa13.59□□□□□ -0.23
RPAIN-209ENST00000571558 TLN1Q9Y490 2541 aaKnown RBP13.59□□□□□ -0.23
RPAIN-209ENST00000571558 TEX15Q9BXT5 2789 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 A0A1W2PNU3 283 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-209ENST00000571558 OR51F1A6NGY5 319 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 A6NNZ2 444 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 NEMP1O14524 444 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 SUV39H1O43463 412 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 MMP20O60882 483 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 PIAS1O75925 651 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 CSF2P04141 144 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 NME1P15531 152 aaKnown RBP13.58□□□□□ -0.24
RPAIN-209ENST00000571558 GCAP28676 217 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 ETV3P41162 512 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 RPIAP49247 311 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 DCDC1P59894 354 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 MGAT5Q09328 741 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 EIF3IQ13347 325 aaKnown RBP13.58□□□□□ -0.24
RPAIN-209ENST00000571558 AGERQ15109 404 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 KBTBD12Q3ZCT8 623 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 TMEM259Q4ZIN3 620 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 TEDDM1Q5T9Z0 273 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 HDXQ7Z353 690 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 KCNMB4Q86W47 210 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 EXD3Q8N9H8 876 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 DTX3LQ8TDB6 740 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 DTD2Q96FN9 168 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 CYTH2Q99418 400 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 DNAJC28Q9NX36 388 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 PKD2L2Q9NZM6 624 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 MARCH4Q9P2E8 410 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-209ENST00000571558 ACSL6Q9UKU0 697 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 ZFR2Q9UPR6 939 aaKnown RBP13.58□□□□□ -0.24
RPAIN-209ENST00000571558 PLAAQ9Y263 795 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 CA5BQ9Y2D0 317 aa13.58□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF106Q9H2Y7 1883 aaKnown RBP13.58□□□□□ -0.24
RPAIN-209ENST00000571558 CCDC187A0A096LP49 1063 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 SPTY2D1-AS1A0A0U1RR47 76 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 AGAP14A8MT82 685 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 GOLGA8KD6RF30 607 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 GOLGA8TH3BQL2 631 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 TMX2-CTNND1H3BSU7 103 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 MAP2K7O14733 419 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 TNFSF15O95150 251 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 GOT2P00505 430 aaKnown RBP13.57□□□□□ -0.24
RPAIN-209ENST00000571558 FOXN2P32314 431 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 SPAM1P38567 509 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 PRAMEP78395 509 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPAIN-209ENST00000571558 HENMT1Q5T8I9 393 aaKnown RBP13.57□□□□□ -0.24
RPAIN-209ENST00000571558 ZDHHC20Q5W0Z9 365 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 NEPROQ6NW34 567 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 AFTPHQ6ULP2 937 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 Q6ZSR6 202 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF765Q7L2R6 523 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 PIANPQ8IYJ0 282 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 NRSN1Q8IZ57 195 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 SLC22A18ASQ8N1D0 253 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF548Q8NEK5 533 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-209ENST00000571558 GPR150Q8NGU9 434 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 OR6P1Q8NGX9 317 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 OR4L1Q8NH43 312 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 OR2W6PQ8NHA6 318 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 CXorf40AQ8TE69 158 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 GLMNQ92990 594 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 NAT6Q93015 286 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 SGF29Q96ES7 293 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 ZIM3Q96PE6 472 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 AGAP2Q99490 1192 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 ARHGAP9Q9BRR9 750 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 MCMBPQ9BTE3 642 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 C1QTNF2Q9BXJ5 285 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 CDH19Q9H159 772 aa13.57□□□□□ -0.24
RPAIN-209ENST00000571558 ABCG8Q9H221 673 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms