RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PCDHB3Q9Y5E6 796 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 MLYCDO95822 493 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 CD52P31358 61 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 BCAP31P51572 246 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 ERVPABLB-1P60509 514 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 PURAQ00577 322 aaKnown RBP17.26■□□□□ 0.35
SCARF1-205ENST00000571272 C18orf21Q32NC0 220 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-205ENST00000571272 FAM98BQ52LJ0 330 aaKnown RBP17.26■□□□□ 0.35
SCARF1-205ENST00000571272 EGFLAMQ63HQ2 1017 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 ZDHHC13Q8IUH4 622 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 SPARTQ8N0X7 666 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 CFAP52Q8N1V2 620 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
SCARF1-205ENST00000571272 KATNAL1Q9BW62 490 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 RIC8BQ9NVN3 520 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 BRCA2P51587 3418 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 MYADML2A6NDP7 307 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 CLPXO76031 633 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 ANXA6P08133 673 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 SERPINF2P08697 491 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 RAP2AP10114 183 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 MAGEA8P43361 318 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 CRY1Q16526 586 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 CYP2A13Q16696 494 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 IL27RAQ6UWB1 636 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 ENPP6Q6UWR7 440 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 C8orf59Q8N0T1 100 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-205ENST00000571272 KLHDC9Q8NEP7 349 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 RAB2BQ8WUD1 216 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 CGREF1Q99674 301 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 TRNAU1APQ9NX07 287 aaKnown RBP17.25■□□□□ 0.35
SCARF1-205ENST00000571272 PAIP2BQ9ULR5 123 aaKnown RBP17.25■□□□□ 0.35
SCARF1-205ENST00000571272 PTPRDP23468 1912 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 A0A0D9SEW6 157 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 A0A0U1RQS6 177 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 G3V2T6 193 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 XYLBO75191 536 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 KATNA1O75449 491 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 JUNBP17275 347 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-205ENST00000571272 PIGAP37287 484 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 LETMD1Q6P1Q0 360 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 GPSM1Q86YR5 675 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 PIANPQ8IYJ0 282 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 METTL6Q8TCB7 284 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 FATE1Q969F0 183 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 NSMCE3Q96MG7 304 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 C17orf80Q9BSJ5 609 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 ZBED2Q9BTP6 218 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 HPS4Q9NQG7 708 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 EXD2Q9NVH0 621 aa17.25■□□□□ 0.35
SCARF1-205ENST00000571272 MYO16Q9Y6X6 1858 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 E2F3O00716 465 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 TSPAN3O60637 253 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 CAPN1P07384 714 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 AGXTP21549 392 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 SPCS2Q15005 226 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 FXNQ16595 210 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 NKG7Q16617 165 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 RGS21Q2M5E4 152 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 GTF2IRD2BQ6EKJ0 949 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 EFL1Q7Z2Z2 1120 aaKnown RBP17.24■□□□□ 0.35
SCARF1-205ENST00000571272 PIWIL3Q7Z3Z3 882 aaKnown RBP17.24■□□□□ 0.35
SCARF1-205ENST00000571272 BTLAQ7Z6A9 289 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 GTF2IRD2Q86UP8 949 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 ATP6V0D2Q8N8Y2 350 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 CHPT1Q8WUD6 406 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 TRUB1Q8WWH5 349 aaKnown RBP17.24■□□□□ 0.35
SCARF1-205ENST00000571272 LINGO1Q96FE5 620 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 CNDP2Q96KP4 475 aaKnown RBP17.24■□□□□ 0.35
SCARF1-205ENST00000571272 CCDC138Q96M89 665 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 SGIP1Q9BQI5 828 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 RAD21L1Q9H4I0 556 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 ACTL8Q9H568 366 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 INIPQ9NRY2 104 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 SLC30A1Q9Y6M5 507 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 IQCA1LA6NCM1 817 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 PTGES3LE9PB15 166 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 STX16O14662 325 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 DFNA5O60443 496 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 PTPRRQ15256 657 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 NR6A1Q15406 480 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 SULT1C3Q6IMI6 304 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 PSAPL1Q6NUJ1 521 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 GLT6D1Q7Z4J2 308 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 IGFN1Q86VF2 1251 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 PEX13Q92968 403 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 ERLEC1Q96DZ1 483 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 BPIFA1Q9NP55 256 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 FAM118AQ9NWS6 357 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 GNPTGQ9UJJ9 305 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
SCARF1-205ENST00000571272 POLR3HQ9Y535 204 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-205ENST00000571272 NLRC5Q86WI3 1866 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 IQCF5A8MTL0 148 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 GPR182O15218 404 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 TULP3O75386 442 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 GMNNO75496 209 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 SERPINB7O75635 380 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 SULT1C4O75897 302 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 NDST3O95803 873 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms