RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 BOCQ9BWV1 1114 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TEX101Q9BY14 249 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 DUSP15Q9H1R2 295 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRIM39Q9HCM9 518 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 SNX15Q9NRS6 342 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TAS2R13Q9NYV9 303 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 SENP1Q9P0U3 644 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CTNNAL1Q9UBT7 734 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 FAM8A1Q9UBU6 413 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 MBD1Q9UIS9 605 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TLK1Q9UKI8 766 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 NOVA2Q9UNW9 492 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CA5BQ9Y2D0 317 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 MYOFQ9NZM1 2061 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 IGLV3-16A0A075B6K0 115 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 A0A087X1B8 175 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRSS38A1L453 326 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 KLHL33A6NCF5 533 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 POM121BA6NF01 834 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 AGAP14A8MT82 685 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 H0Y8X5 98 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 H3BM21 787 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 TPP1O14773 563 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 KPNA5O15131 536 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 BCAT2O15382 392 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 HAUS5O94927 633 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 SOD1P00441 154 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 AHSGP02765 367 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 APOA4P06727 396 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 GSTM1P09488 218 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ITGB6P18564 788 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 CD38P28907 300 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 CRABP2P29373 138 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 TYK2P29597 1187 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 GNPDA1P46926 289 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 POLD2P49005 469 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRLHRP49683 370 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 RGS4P49798 205 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 RNF144AP50876 292 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 BLKP51451 505 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 PFN3P60673 137 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 RAB10P61026 200 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 GSTM4Q03013 218 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM115Q12893 351 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 DNAJC3Q13217 504 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 SRSF5Q13243 272 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 SEPT7Q16181 437 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 BCL7AQ4VC05 210 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 CTSL3PQ5NE16 218 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 RBM20Q5T481 1227 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 HECTD2Q5U5R9 776 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 LRRC8EQ6NSJ5 796 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 KLC3Q6P597 504 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ENPP7Q6UWV6 458 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 Q6ZSR6 202 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 MICALCLQ6ZW33 695 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 CCDC91Q7Z6B0 441 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ABI3BPQ7Z7G0 1075 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 TBC1D1Q86TI0 1168 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 DCP2Q8IU60 420 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC41A1Q8IVJ1 513 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 SRRM1Q8IYB3 904 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 MAML2Q8IZL2 1156 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF295-AS1Q8N0V1 137 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 DCLK2Q8N568 766 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZBTB2Q8N680 514 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 CLDN19Q8N6F1 224 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR56A4Q8NGH8 313 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 SKA2Q8WVK7 121 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ELMO1Q92556 727 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 FUBP1Q96AE4 644 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM159Q96B96 161 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZBTB9Q96C00 473 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 FAM136AQ96C01 138 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 PGM2Q96G03 612 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 KLHDC7BQ96G42 594 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 COX14Q96I36 57 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 CABS1Q96KC9 395 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR2M4Q96R27 311 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 KLF6Q99612 283 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 AARSD1Q9BTE6 412 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 DHRS4Q9BTZ2 278 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 VPS11Q9H270 941 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 OSGEPL1Q9H4B0 414 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 RMI1Q9H9A7 625 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 CARS2Q9HA77 564 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 POPDC3Q9HBV1 291 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPAMQ9HCL2 828 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 MED4Q9NPJ6 270 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 SPATS2LQ9NUQ6 558 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF358Q9NW07 568 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ATXN10Q9UBB4 475 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNHIT2Q9UHR6 403 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 LGALS13Q9UHV8 139 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM98Q9Y2Y6 226 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 HS3ST3A1Q9Y663 406 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 COL6A3P12111 3177 aa6.49□□□□□ -1.37
CTDNEP1-204ENST00000570484 A0A1B0GTW7 788 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms