RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GLYATL1P3A0A0U1RQE8 302 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 SOWAHDA6NJG2 315 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 OR2AG2A6NM03 316 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 POP7O75817 140 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 NDUFA10O95299 355 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 PRKAR1AP10644 381 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 STAT5AP42229 794 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 DMPKQ09013 629 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 CDC20Q12834 499 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 RPE65Q16518 533 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 BORAQ6PGQ7 559 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 FAM92BQ6ZTR7 304 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 GLT6D1Q7Z4J2 308 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 PRSS42Q7Z5A4 293 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 PLXDC1Q8IUK5 500 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 CCDC50Q8IVM0 306 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 LILRA3Q8N6C8 439 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 GDAP1Q8TB36 358 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 ACTL9Q8TC94 416 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 KLHL6Q8WZ60 621 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 ALG3Q92685 438 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 NRTNQ99748 197 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 LACRTQ9GZZ8 138 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 TRABDQ9H4I3 376 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 GPN2Q9H9Y4 310 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 POT1Q9NUX5 634 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 SMOXQ9NWM0 555 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 EPN1Q9Y6I3 576 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 DOPEY2Q9Y3R5 2298 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 FER1L5A0AVI2 2057 aa13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 SNRNP200O75643 2136 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-211ENST00000569653 TNRC6AQ8NDV7 1962 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 IGHV5-51A0A0C4DH38 117 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 A0A0U1RQJ8 604 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 ZNF891A8MT65 544 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 APOC4-APOC2K7ER74 178 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 CCL22O00626 93 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 POLR1CO15160 346 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 PJA2O43164 708 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 MTSS1O43312 755 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 APOC2P02655 101 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 FURINP09958 794 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 HLA-DPA1P20036 260 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 IDSP22304 550 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 PSMB4P28070 264 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 XIAPP98170 497 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 OTUD4Q01804 1114 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 FOXM1Q08050 763 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 ABHD18Q0P651 414 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 MPP3Q13368 585 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 KCNAB1Q14722 419 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 DENND5AQ6IQ26 1287 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 CCDC70Q6NSX1 233 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 TMEM220Q6QAJ8 160 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 RANBP10Q6VN20 620 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 RAD9BQ6WBX8 426 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 BZW1Q7L1Q6 419 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 DET1Q7L5Y6 550 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 AVL9Q8NBF6 648 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 GALNT6Q8NCL4 622 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 STARD8Q92502 1023 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 CXorf40BQ96DE9 158 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 ELMO2Q96JJ3 720 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 PPM1MQ96MI6 270 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 OR6C1Q96RD1 312 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 SRPK1Q96SB4 655 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 RUFY1Q96T51 708 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 VAT1Q99536 393 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 BAG1Q99933 345 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 SLC25A18Q9H1K4 315 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 HACD3Q9P035 362 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 SEMA5BQ9P283 1151 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 FKBPLQ9UIM3 349 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 CFAP20Q9Y6A4 193 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 LRRK2Q5S007 2527 aa13.56□□□□□ -0.24
GTF3C1-211ENST00000569653 HACD1B0YJ81 288 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 H7C0C1 242 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 WISP1O95388 367 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 PRAMEF1O95521 474 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 AMD1P17707 334 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 MAP4P27816 1152 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 PBLDP30039 288 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 ATP5OP48047 213 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 KCNAB2Q13303 367 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 XRCC4Q13426 336 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 LDLRAP1Q5SW96 308 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 FNBP1LQ5T0N5 605 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 DAAM2Q86T65 1068 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 TMEM135Q86UB9 458 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 AMZ2Q86W34 360 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 PTRH1Q86Y79 214 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 LRRC57Q8N9N7 239 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 OR4K2Q8NGD2 314 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 CCDC110Q8TBZ0 833 aa13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 RBM41Q96IZ5 413 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-211ENST00000569653 RMDN2Q96LZ7 410 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms