RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SELENOMQ8WWX9 145 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CDC6Q99741 560 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 FUNDC2Q9BWH2 189 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 OXSMQ9NWU1 459 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 HCN3Q9P1Z3 774 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 FNIP2Q9P278 1114 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 KCNN3Q9UGI6 736 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ABCA6Q8N139 1617 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TYROBPO43914 113 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CCNDBP1O95273 360 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TYRP14679 529 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ENDOUP21128 410 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CERS1P27544 350 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DCKP27707 260 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DPP6P42658 865 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CBX5P45973 191 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ALDH7A1P49419 539 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PRKCDQ05655 676 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SCARF1Q14162 830 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 GK5Q6ZS86 529 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 APTXQ7Z2E3 356 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 KBTBD6Q86V97 674 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF548Q8NEK5 533 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OR13J1Q8NGT2 312 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ELMO3Q96BJ8 720 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CHFRQ96EP1 664 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 RIPOR3Q96MK2 946 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PKP2Q99959 881 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SLC6A16Q9GZN6 736 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 KCNK13Q9HB14 408 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PAK1IP1Q9NWT1 392 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ADAMTS13Q76LX8 1427 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TMEM221A6NGB7 291 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 C19orf81C9J6K1 198 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 POLRMTO00411 1230 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ADAM10O14672 748 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OR10H3O60404 316 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TGFB3P10600 412 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PTBP1P26599 531 aaKnown RBP eCLIP7.04□□□□□ -1.288e-9■□□□□ 10.8
CNOT1-216ENST00000569240 MAPK3P27361 379 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CCR1P32246 355 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ARSFP54793 590 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DNAJB13P59910 316 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 KIAA1614Q5VZ46 1190 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CERS6Q6ZMG9 384 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ZDHHC21Q8IVQ6 265 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 KLHL36Q8N4N3 616 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OR7G3Q8NG95 312 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 MAELQ96JY0 434 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TBC1D24Q9ULP9 559 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 LOC100130705A0A1B0GUX0 176 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 KCNU1A8MYU2 1149 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 BTN3A1O00481 513 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 UGT2B17O75795 530 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SSX2Q16385 188 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF311Q5JNZ3 666 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 RALGPS1Q5JS13 557 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DEDD2Q8WXF8 326 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CCDC106Q9BWC9 280 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OR51E2Q9H255 320 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 HEBP1Q9NRV9 189 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 NUDT15Q9NV35 164 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TMX2Q9Y320 296 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CARNS1A5YM72 827 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ZMPSTE24O75844 475 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CLUP10909 449 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 RGS6P49758 472 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF81P51508 661 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CD83Q01151 205 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SLC13A2Q13183 592 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 MPP2Q14168 576 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 CDKL4Q5MAI5 379 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 RAB12Q6IQ22 244 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 NOTUMQ6P988 496 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 UGT2A3Q6UWM9 527 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OR7G2Q8NG99 324 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 RPLP0P6Q8NHW5 317 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 AIF1LQ9BQI0 150 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 TTLL2Q9BWV7 592 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 POLR2J2Q9GZM3 115 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 A0A1B0GVM2 712 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PRORSD1PA6NEY8 169 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 EIF1AYO14602 144 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DCLK1O15075 740 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ARPC2O15144 300 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 SSX5O60225 188 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 NPM3O75607 178 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 NDUFB10O96000 172 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 DNTTP04053 509 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 GNAO1P09471 354 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PRKCHP24723 683 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 PRDX5P30044 214 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 MAGEA3P43357 314 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 EIF1AXP47813 144 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 EIF2S3LQ2VIR3 472 aaKnown RBP7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OR2T5Q6IEZ7 315 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 OR2T29Q8NH02 315 aa7.04□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF641Q96N77 438 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms