RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 DDA1Q9BW61 102 aa14.19□□□□□ -0.14
CMTM3-215ENST00000568477 ASPSCR1Q9BZE9 553 aa14.19□□□□□ -0.14
CMTM3-215ENST00000568477 OCIAD1Q9NX40 245 aa14.19□□□□□ -0.14
CMTM3-215ENST00000568477 TRMT1Q9NXH9 659 aaKnown RBP14.19□□□□□ -0.14
CMTM3-215ENST00000568477 SLC39A1Q9NY26 324 aa14.19□□□□□ -0.14
CMTM3-215ENST00000568477 ZNF624Q9P2J8 865 aaPredicted RBP14.19□□□□□ -0.14
CMTM3-215ENST00000568477 FEZ2Q9UHY8 353 aaPredicted RBP14.19□□□□□ -0.14
CMTM3-215ENST00000568477 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
CMTM3-215ENST00000568477 CAPN6Q9Y6Q1 641 aa14.19□□□□□ -0.14
CMTM3-215ENST00000568477 MN1Q10571 1320 aaPredicted RBP14.18□□□□□ -0.14
CMTM3-215ENST00000568477 OR52A4PA6NMU1 304 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 POP7O75817 140 aaKnown RBP14.18□□□□□ -0.14
CMTM3-215ENST00000568477 MSH3P20585 1137 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 CA5AP35218 305 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 DMPKQ09013 629 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 KLF1Q13351 362 aaPredicted RBP14.18□□□□□ -0.14
CMTM3-215ENST00000568477 PARP6Q2NL67 630 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 DTX1Q86Y01 620 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 REXO1L1PQ8IX06 675 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 RBM12BQ8IXT5 1001 aaKnown RBP14.18□□□□□ -0.14
CMTM3-215ENST00000568477 RNF10Q8N5U6 811 aaKnown RBP14.18□□□□□ -0.14
CMTM3-215ENST00000568477 PMEPA1Q969W9 287 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 WBP1Q96G27 269 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 HES6Q96HZ4 224 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 ZNF514Q96K75 400 aaPredicted RBP14.18□□□□□ -0.14
CMTM3-215ENST00000568477 TSGA10Q9BZW7 698 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 ARNT2Q9HBZ2 717 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 KLHL3Q9UH77 587 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 KCTD3Q9Y597 815 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 B3GALT1Q9Y5Z6 326 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 DNMT3AQ9Y6K1 912 aaPredicted RBP14.18□□□□□ -0.14
CMTM3-215ENST00000568477 KALRNO60229 2985 aa14.18□□□□□ -0.14
CMTM3-215ENST00000568477 OR2AG2A6NM03 316 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 EFSO43281 561 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 SRP72O76094 671 aaKnown RBP14.17□□□□□ -0.14
CMTM3-215ENST00000568477 UBXN7O94888 489 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 TYRP1P17643 537 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 AMD1P17707 334 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 ATP1A2P50993 1020 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 ZNF140P52738 457 aaPredicted RBP14.17□□□□□ -0.14
CMTM3-215ENST00000568477 TERF1P54274 439 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 SPARCL1Q14515 664 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 P3H1Q32P28 736 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 FNBP1LQ5T0N5 605 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 DCAF12Q5T6F0 453 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 KIAA1614Q5VZ46 1190 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 DENND5AQ6IQ26 1287 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 PCSK4Q6UW60 755 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 VASH2Q86V25 355 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 KLHDC8BQ8IXV7 354 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 BMPERQ8N8U9 685 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 OR13C4Q8NGS5 318 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 SLC35B2Q8TB61 432 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 C16orf45Q96MC5 204 aaPredicted RBP14.17□□□□□ -0.14
CMTM3-215ENST00000568477 TEFMQ96QE5 360 aaKnown RBP14.17□□□□□ -0.14
CMTM3-215ENST00000568477 ASB8Q9H765 288 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 LRRC40Q9H9A6 602 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 SLC40A1Q9NP59 571 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 OGFRQ9NZT2 677 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 R3HDM2Q9Y2K5 976 aaKnown RBP14.17□□□□□ -0.14
CMTM3-215ENST00000568477 SLC30A1Q9Y6M5 507 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 SDK2Q58EX2 2172 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 PIEZO2Q9H5I5 2752 aa14.17□□□□□ -0.14
CMTM3-215ENST00000568477 SPTA1P02549 2419 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 TCRBV7S2A1N4TA0A589 114 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 KRT86O43790 486 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 METTL18O95568 372 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 C9P02748 559 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 PRB1P04280 392 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 ANKRD34CP0C6C1 535 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 ITGALP20701 1170 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 PBLDP30039 288 aaPredicted RBP14.16□□□□□ -0.14
CMTM3-215ENST00000568477 HADHAP40939 763 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 ARSDP51689 593 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 GFERP55789 205 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 XIAPP98170 497 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 MC2RQ01718 297 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 SRSF6Q13247 344 aaKnown RBP14.16□□□□□ -0.14
CMTM3-215ENST00000568477 MSLNQ13421 630 aaPredicted RBP14.16□□□□□ -0.14
CMTM3-215ENST00000568477 GPR18Q14330 331 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 CLCA4Q14CN2 919 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 SEL1L2Q5TEA6 688 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 ANKS6Q68DC2 871 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 CEACAM20Q6UY09 585 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 DET1Q7L5Y6 550 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 UBE2Q2Q8WVN8 375 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 JPH3Q8WXH2 748 aaPredicted RBP14.16□□□□□ -0.14
CMTM3-215ENST00000568477 TTC9Q92623 222 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 ULK4Q96C45 1275 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 SGF29Q96ES7 293 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 DCUN1D1Q96GG9 259 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 C9orf72Q96LT7 481 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 C19orf43Q9BQ61 176 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 TMEM121Q9BTD3 319 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 CRLS1Q9UJA2 301 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 GUCA1BQ9UMX6 200 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 WDR37Q9Y2I8 494 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 CFAP46Q8IYW2 2715 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 COL6A6A6NMZ7 2263 aa14.16□□□□□ -0.14
CMTM3-215ENST00000568477 ZNF106Q9H2Y7 1883 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms