RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ITGALP20701 1170 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ACRV1P26436 265 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 CXCR5P32302 372 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 FOXN2P32314 431 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TSPAN7P41732 249 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 KCNJ1P48048 391 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 PRLHRP49683 370 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 CDKN1CP49918 316 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ARSDP51689 593 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 PCBP4P57723 403 aaKnown RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TLE3Q04726 772 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 CACNG1Q06432 222 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 SNX1Q13596 522 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 GTF2H3Q13889 308 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ITIH4Q14624 930 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 POU6F1Q14863 301 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 C16orf72Q14CZ0 275 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TPSAB1Q15661 275 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 INSCQ1MX18 579 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 C3orf38Q5JPI3 329 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TSTD2Q5T7W7 516 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 CRTC3Q6UUV7 619 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 PACS1Q6VY07 963 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 FAM83HQ6ZRV2 1179 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 USP53Q70EK8 1073 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF534Q76KX8 674 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 PRUNE1Q86TP1 453 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 DTX1Q86Y01 620 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TRAPPC5Q8IUR0 188 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 PIANPQ8IYJ0 282 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 BMPERQ8N8U9 685 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ZNF248Q8NDW4 579 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 OR10G6Q8NH81 332 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 SGF29Q96ES7 293 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 CCDC97Q96F63 343 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TTC25Q96NG3 672 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 SLC38A3Q99624 504 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 COPS8Q99627 209 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 CMKLR1Q99788 373 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 FOXP3Q9BZS1 431 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 SPRY4Q9C004 299 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TWSG1Q9GZX9 223 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 PRORYQ9H606 182 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 SUDS3Q9H7L9 328 aaPredicted RBP8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 RDH14Q9HBH5 336 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 RAB6BQ9NRW1 208 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 KCND1Q9NSA2 647 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TREX1Q9NSU2 369 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 ZDHHC3Q9NYG2 299 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 MGAQ8IWI9 3026 aa8.03□□□□□ -1.12
HDGFL3-205ENST00000568129 TRBV23OR9-2A0A075B6M9 112 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 OR2AG2A6NM03 316 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 RRP8O43159 456 aaKnown RBP8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 DUX1O43812 170 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 TNFSF15O95150 251 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 RALBP11234 206 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 FGF3P11487 239 aaPredicted RBP8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 MSH3P20585 1137 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 CD82P27701 267 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 RBMS1P29558 406 aaKnown RBP8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 MC4RP32245 332 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 ETV5P41161 510 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 CD151P48509 253 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 NPY2RP49146 381 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 RPA4Q13156 261 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 NFE2L1Q14494 772 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 KCNJ11Q14654 390 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 RPE65Q16518 533 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 AMZ1Q400G9 498 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 FNBP1LQ5T0N5 605 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 LYPLAL1Q5VWZ2 237 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 NKAIN2Q5VXU1 208 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 TTC27Q6P3X3 843 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 LRRC8BQ6P9F7 803 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 CERS6Q6ZMG9 384 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 SERPINA9Q86WD7 417 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 SPACA3Q8IXA5 215 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 SLC35F6Q8N357 371 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 CCDC89Q8N998 374 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 GDAP1Q8TB36 358 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 COG1Q8WTW3 980 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 SLCO2A1Q92959 643 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 ZNF778Q96MU6 729 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 OSBPL9Q96SU4 736 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 INSM2Q96T92 566 aaPredicted RBP8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 NAP1L3Q99457 506 aaPredicted RBP8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 CCM2Q9BSQ5 444 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 KIFC1Q9BW19 673 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 IL22Q9GZX6 179 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 STN1Q9H668 368 aaKnown RBP8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 MRM3Q9HC36 420 aaKnown RBP8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 TMEM9Q9P0T7 183 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 CRLS1Q9UJA2 301 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 SNX12Q9UMY4 172 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 TCAF1Q9Y4C2 921 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 LOXL2Q9Y4K0 774 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 SLC30A1Q9Y6M5 507 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 ANKRD12Q6UB98 2062 aa8.02□□□□□ -1.13
HDGFL3-205ENST00000568129 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms