RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.25■□□□□ 0.99
NME3-210ENST00000567271 SERPINB12Q96P63 405 aa21.25■□□□□ 0.99
NME3-210ENST00000567271 SOX13Q9UN79 622 aa21.25■□□□□ 0.99
NME3-210ENST00000567271 COL27A1Q8IZC6 1860 aaPredicted RBP21.24■□□□□ 0.99
NME3-210ENST00000567271 PDX1P52945 283 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 UBE2IP63279 158 aaKnown RBP21.24■□□□□ 0.99
NME3-210ENST00000567271 HHEXQ03014 270 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 NFE2L1Q14494 772 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 LYPLAL1Q5VWZ2 237 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 METRNLQ641Q3 311 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 CERS6Q6ZMG9 384 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 MPP5Q8N3R9 675 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 CLDN19Q8N6F1 224 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 AVL9Q8NBF6 648 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 SH3KBP1Q96B97 665 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 STN1Q9H668 368 aaKnown RBP21.24■□□□□ 0.99
NME3-210ENST00000567271 ZNF624Q9P2J8 865 aaPredicted RBP21.24■□□□□ 0.99
NME3-210ENST00000567271 CPNE7Q9UBL6 633 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 WDR37Q9Y2I8 494 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 PCDHB1Q9Y5F3 818 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 WDFY3Q8IZQ1 3526 aa21.24■□□□□ 0.99
NME3-210ENST00000567271 SDR42E2A6NKP2 422 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 D6RAR5 112 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 DNALI1O14645 258 aaPredicted RBP21.23■□□□□ 0.99
NME3-210ENST00000567271 AP2A2O94973 939 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 IVDP26440 423 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 PBLDP30039 288 aaPredicted RBP21.23■□□□□ 0.99
NME3-210ENST00000567271 SLC19A1P41440 591 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 NSG1P42857 185 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 MAGEA3P43357 314 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 AMZ1Q400G9 498 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 FASTKD1Q53R41 847 aaKnown RBP21.23■□□□□ 0.99
NME3-210ENST00000567271 CES3Q6UWW8 571 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 XKR5Q6UX68 686 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 JAMLQ86YT9 394 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 GRAMD1AQ96CP6 724 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 MFSD3Q96ES6 412 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 TTC1Q99614 292 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 SLC38A3Q99624 504 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 NRSN2Q9GZP1 204 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 KCNK4Q9NYG8 393 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.23■□□□□ 0.99
NME3-210ENST00000567271 ATXN7L1Q9ULK2 861 aaPredicted RBP21.23■□□□□ 0.99
NME3-210ENST00000567271 ENTPD2Q9Y5L3 495 aa21.23■□□□□ 0.99
NME3-210ENST00000567271 IGHV1OR21-1A0A087WYE8 117 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 C17orf113A0A1B0GUU1 675 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 MAGEB16A2A368 324 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 CD1CP29017 333 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 SQSTM1Q13501 440 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 SEMA3AQ14563 771 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 CLCA4Q14CN2 919 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 PACS1Q6VY07 963 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 PCGF5Q86SE9 256 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 ZNF761Q86XN6 746 aaPredicted RBP21.22■□□□□ 0.99
NME3-210ENST00000567271 CCM2Q9BSQ5 444 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 CATSPERZQ9NTU4 200 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 ACSL5Q9ULC5 683 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 PRSS21Q9Y6M0 314 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 UNC13CQ8NB66 2214 aa21.22■□□□□ 0.99
NME3-210ENST00000567271 OR52A4PA6NMU1 304 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 CD3EAPO15446 510 aaKnown RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 TTI1O43156 1089 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 CPNE6O95741 557 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 VIPP01282 170 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 CAPNS1P04632 268 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 PROS1P07225 676 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 ARNTP27540 789 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 HALP42357 657 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 DHX34Q14147 1143 aaKnown RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 RTP5Q14D33 572 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 CLPPQ16740 277 aaPredicted RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 ZNF658BQ4V348 819 aaPredicted RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 AARS2Q5JTZ9 985 aaKnown RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 IZUMO3Q5VZ72 239 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 CASC4Q6P4E1 433 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 TMPRSS9Q7Z410 1059 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 B3GNT8Q7Z7M8 397 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 HOOK3Q86VS8 718 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 TRIM48Q8IWZ4 208 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 CFAP206Q8IYR0 622 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 SPATA4Q8NEY3 305 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 HM13Q8TCT9 377 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 ATXN7L3BQ96GX2 97 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 C16orf45Q96MC5 204 aaPredicted RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 KRT12Q99456 494 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 VPS37BQ9H9H4 285 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 UCK1Q9HA47 277 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 POT1Q9NUX5 634 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 SAMD15Q9P1V8 674 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 MARCH4Q9P2E8 410 aaPredicted RBP21.21■□□□□ 0.99
NME3-210ENST00000567271 ANAPC5Q9UJX4 755 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 PSMD13Q9UNM6 376 aa21.21■□□□□ 0.99
NME3-210ENST00000567271 FAM237BA0A1B0GVD1 139 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 OR1I1O60431 355 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 VAPBO95292 243 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 PPARGP37231 505 aaPredicted RBP21.2■□□□□ 0.98
NME3-210ENST00000567271 GPLD1P80108 840 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 RPE65Q16518 533 aa21.2■□□□□ 0.98
NME3-210ENST00000567271 NKAIN2Q5VXU1 208 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms