RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 OSMRQ99650 979 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 SEMA3CQ99985 751 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 APOBEC3GQ9HC16 384 aaKnown RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 IL1RAPQ9NPH3 570 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TLL2Q9Y6L7 1015 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 NPEPPSL1A6NEC2 478 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 FAM47E-STBD1D6RA91 191 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 F5H5T6 163 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 GNAO1P09471 354 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 DNAJB2P25686 324 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 CEBPGP53567 150 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 KCNAB2Q13303 367 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 NFE2L1Q14494 772 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TSC22D1Q15714 1073 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 PIK3R6Q5UE93 754 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 FAM92BQ6ZTR7 304 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 SLC26A9Q7LBE3 791 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 FAM126AQ9BYI3 521 aaPredicted RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 SLC6A15Q9H2J7 730 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 PPIEQ9UNP9 301 aaKnown RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 RNF6Q9Y252 685 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 ACKR2O00590 384 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 CYP3A4P08684 503 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TYMPP19971 482 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 FNTBP49356 437 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 RHOAP61586 193 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 PPP2R2BQ00005 443 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TSTQ16762 297 aaKnown RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 ITCHQ96J02 903 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TXLNGYQ9BZA5 131 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 SIAEQ9HAT2 523 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 PHF11Q9UIL8 331 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 AP3M1Q9Y2T2 418 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TRAV6A0A075B6T7 132 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 CLDN5O00501 218 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 NARSO43776 548 aaKnown RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 SLC6A2P23975 617 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 CHRNA5P30532 468 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 UGT2B15P54855 530 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 CAMK2GQ13555 558 aaPredicted RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 DTX3Q8N9I9 347 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 FAM151AQ8WW52 585 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 JPH3Q8WXH2 748 aaPredicted RBP13.18□□□□□ -0.3
UBFD1-207ENST00000567212 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
UBFD1-207ENST00000567212 ZNF879B4DU55 563 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 B4GALT5O43286 388 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 COL6A2P12110 1019 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CAPZA2P47755 286 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CELF3Q5SZQ8 465 aaKnown RBP13.17□□□□□ -0.3
UBFD1-207ENST00000567212 OR6J1Q8NGC5 347 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 BRD7Q9NPI1 651 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 SLC35C2Q9NQQ7 365 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 ERVK-18Q9QC07 812 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 UXTQ9UBK9 157 aaPredicted RBP13.17□□□□□ -0.3
UBFD1-207ENST00000567212 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 PCDHB3Q9Y5E6 796 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 TPST2O60704 377 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CCNDBP1O95273 360 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CDH18Q13634 790 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 TEX44Q53QW1 395 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CXXC5Q7LFL8 322 aaKnown RBP13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CCDC185Q8N715 623 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 BSNDQ8WZ55 320 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CRELD1Q96HD1 420 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 ITPAQ9BY32 194 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 LRRC3Q9BY71 257 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 EMC3Q9P0I2 261 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 VPS28Q9UK41 221 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 IQCF5A8MTL0 148 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 VILLO15195 856 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 OTCP00480 354 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 OR1G1P47890 313 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 C6orf141Q5SZD1 244 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 IDNKQ5T6J7 187 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 PMF1Q6P1K2 205 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 SPATA19Q7Z5L4 167 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 CCDC36Q8IYA8 594 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 SNX27Q96L92 541 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 NANSQ9NR45 359 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 DMAC2Q9NW81 257 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 MKLN1Q9UL63 735 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 EDARQ9UNE0 448 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 SPIN1Q9Y657 262 aaPredicted RBP13.17□□□□□ -0.3
UBFD1-207ENST00000567212 A0A1W2PQ67 120 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 ECDO95905 644 aaPredicted RBP13.17□□□□□ -0.3
UBFD1-207ENST00000567212 FCER2P06734 321 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.32e-8■■■□□ 17.4
UBFD1-207ENST00000567212 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
UBFD1-207ENST00000567212 XRRA1Q6P2D8 792 aa13.17□□□□□ -0.3
UBFD1-207ENST00000567212 USP45Q70EL2 814 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms