RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PYCR3Q53H96 274 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 UBAP2Q5T6F2 1119 aaKnown RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 ZNF449Q6P9G9 518 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 CCNI2Q6ZMN8 369 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 KIAA0408Q6ZU52 694 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 C3orf62Q6ZUJ4 267 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 C2CD4AQ8NCU7 369 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 ZNF548Q8NEK5 533 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 SCG3Q8WXD2 468 aaKnown RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 LPGAT1Q92604 370 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 SCARF2Q96GP6 870 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 ZNF514Q96K75 400 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 TCF12Q99081 682 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 CLPBQ9H078 707 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 CAAP1Q9H8G2 361 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 IL21RQ9HBE5 538 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 FBXO6Q9NRD1 293 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 INTS10Q9NVR2 710 aaKnown RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 MOCS1Q9NZB8 636 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 SPASTQ9UBP0 616 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 ZNHIT2Q9UHR6 403 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 FBXO5Q9UKT4 447 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 GPSM3Q9Y4H4 160 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 PCYT1BQ9Y5K3 369 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 DMDP11532 3685 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 F8W8V4 182 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 QSOX1O00391 747 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 KMOO15229 486 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 GFRA3O60609 400 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 AP2A2O94973 939 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 FUCA1P04066 466 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TUBBP07437 444 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 CTSEP14091 401 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 RPS3P23396 243 aaKnown RBP eCLIP11.3□□□□□ -0.63e-11■■□□□ 13.8
KARS-207ENST00000566560 RXRGP48443 463 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 RPIAP49247 311 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 PMS2P54278 862 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 ILF3Q12906 894 aaKnown RBP eCLIP11.3□□□□□ -0.6
KARS-207ENST00000566560 LRP8Q14114 963 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
KARS-207ENST00000566560 EFTUD2Q15029 972 aaKnown RBP eCLIP11.3□□□□□ -0.63e-6■■■■■ 41.9
KARS-207ENST00000566560 SHBQ15464 509 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 PRRT3Q5FWE3 981 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TEDDM1Q5T9Z0 273 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TMEM220Q6QAJ8 160 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
KARS-207ENST00000566560 CHST15Q7LFX5 561 aaPredicted RBP11.3□□□□□ -0.6
KARS-207ENST00000566560 LRRC6Q86X45 466 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 ZNF547Q8IVP9 402 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 FSTL5Q8N475 847 aaPredicted RBP11.3□□□□□ -0.6
KARS-207ENST00000566560 CLDN19Q8N6F1 224 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 BEND7Q8N7W2 519 aaPredicted RBP11.3□□□□□ -0.6
KARS-207ENST00000566560 LMX1AQ8TE12 382 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 FBF1Q8TES7 1133 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 SGF29Q96ES7 293 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TIMM29Q9BSF4 260 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TXLNGYQ9BZA5 131 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TMEM168Q9H0V1 697 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TM7SF3Q9NS93 570 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 TRNAU1APQ9NX07 287 aaKnown RBP11.3□□□□□ -0.6
KARS-207ENST00000566560 NSMCE4AQ9NXX6 385 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 GNPTGQ9UJJ9 305 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 PRSS21Q9Y6M0 314 aa11.3□□□□□ -0.6
KARS-207ENST00000566560 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
KARS-207ENST00000566560 ARHGEF17Q96PE2 2063 aaPredicted RBP11.29□□□□□ -0.6
KARS-207ENST00000566560 FAM159BA6NKW6 160 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 AQP9O43315 295 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 SGTAO43765 313 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 PIAS1O75925 651 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 FTH1P02794 183 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 CELA2BP08218 269 aaPredicted RBP11.29□□□□□ -0.6
KARS-207ENST00000566560 ABHD2P08910 425 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 OR56A5P0C7T3 313 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 VCLP18206 1134 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 TGM1P22735 817 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 CD151P48509 253 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 NAB1Q13506 487 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 C1orf61Q13536 156 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 ELOCQ15369 112 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 KBTBD12Q3ZCT8 623 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 ZNF789Q5FWF6 425 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 CTSL3PQ5NE16 218 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
KARS-207ENST00000566560 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 GALNT7Q86SF2 657 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 SLC26A11Q86WA9 606 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 CTAGE3PQ8IX95 158 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 AENQ8WTP8 325 aaKnown RBP11.29□□□□□ -0.6
KARS-207ENST00000566560 TSSK1BQ9BXA7 367 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 GSDMCQ9BYG8 508 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 P2RY12Q9H244 342 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 CCDC68Q9H2F9 335 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 OSGEPL1Q9H4B0 414 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 SMYD2Q9NRG4 433 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 RXFP3Q9NSD7 469 aa11.29□□□□□ -0.6
KARS-207ENST00000566560 DNAAF2Q9NVR5 837 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms