RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CHRNA5P30532 468 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 HSPA1LP34931 641 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 FRKP42685 505 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 ASMTP46597 345 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TRPC1P48995 793 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 CENPAP49450 140 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RABGGTBP53611 331 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 MTTPP55157 894 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TMPRSS3P57727 454 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SRP54P61011 504 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 BEX3Q00994 111 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PMP22Q01453 160 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 GAD2Q05329 585 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RUNX1T1Q06455 604 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SREBF2Q12772 1141 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 OVGP1Q12889 678 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 FOXL1Q12952 345 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RIPK1Q13546 671 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SNX1Q13596 522 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 FHL2Q14192 279 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 GAMTQ14353 236 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 IMMTQ16891 758 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 USH1GQ495M9 461 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SYTL3Q4VX76 610 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 ESCO2Q56NI9 601 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 AWAT1Q58HT5 328 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RNASE12Q5GAN4 147 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TCTE1Q5JU00 501 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PRAMEF19Q5SWL8 479 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 STRIP1Q5VSL9 837 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 DCAF12L2Q5VW00 463 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TBC1D9BQ66K14 1250 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SP5Q6BEB4 398 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 C16orf87Q6PH81 154 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TMEM65Q6PI78 240 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 NHLRC1Q6VVB1 395 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 Q6ZRM9 215 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 DCDC5Q6ZRR9 648 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 DPPA4Q7L190 304 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 LIMS2Q7Z4I7 341 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 CUZD1Q86UP6 607 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 FOXP4Q8IVH2 680 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 AQP12AQ8IXF9 295 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 HACE1Q8IYU2 909 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 GALNT16Q8N428 558 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 KIAA0895Q8NCT3 520 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 AGBL3Q8NEM8 1001 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 OR52K2Q8NGK3 314 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 WDR20Q8TBZ3 569 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 BRSK1Q8TDC3 778 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TAS1R2Q8TE23 839 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 CHURC1Q8WUH1 139 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TMEM170AQ8WVE7 144 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 UBLCP1Q8WVY7 318 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SELENOMQ8WWX9 145 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RIT1Q92963 219 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SPDL1Q96EA4 605 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 EEF2KMTQ96G04 330 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 VCPIP1Q96JH7 1222 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TTC25Q96NG3 672 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 FRG2BQ96QU4 278 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PANX3Q96QZ0 392 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 MPHOSPH9Q99550 1183 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 ADAM2Q99965 735 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TEX13AQ9BXU3 409 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 CIPCQ9C0C6 399 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 MTMR12Q9C0I1 747 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 LSG1Q9H089 658 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 DDX47Q9H0S4 455 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RAB17Q9H0T7 212 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PPIL3Q9H2H8 161 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 HIPK3Q9H422 1215 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RIBC2Q9H4K1 309 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF768Q9H5H4 540 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 RPF1Q9H9Y2 349 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TXNRD2Q9NNW7 524 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 ATAD3AQ9NVI7 634 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 NDUFA13Q9P0J0 144 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 TBC1D7Q9P0N9 293 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 COX16Q9P0S2 106 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PLEKHB1Q9UF11 243 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PLA2G4CQ9UP65 541 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 CHST2Q9Y4C5 530 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SIRT4Q9Y6E7 314 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 A3GALT2U3KPV4 340 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 LAMC3Q9Y6N6 1575 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 KIF13AQ9H1H9 1805 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 ASTN2O75129 1339 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 EMSYQ7Z589 1322 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CYP2D7A0A087X1C5 515 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 C2orf92A0A1B0GVN3 265 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CTAGE15A4D2H0 777 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PLK4O00444 970 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 EBAG9O00559 213 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 E2F3O00716 465 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CLDN4O14493 209 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 AP5Z1O43299 807 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 PLPP2O43688 288 aa3.28□□□□□ -1.88
HERPUD1-211ENST00000566550 CREG1O75629 220 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms