RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 SPRY4Q9C004 299 aa9.85□□□□□ -0.83
CMTM3-209ENST00000565003 ZCCHC2Q9C0B9 1178 aaKnown RBP9.85□□□□□ -0.83
CMTM3-209ENST00000565003 SIDT1Q9NXL6 827 aaKnown RBP9.85□□□□□ -0.83
CMTM3-209ENST00000565003 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.85□□□□□ -0.834e-6■■□□□ 12.2
CMTM3-209ENST00000565003 FKBPLQ9UIM3 349 aa9.85□□□□□ -0.83
CMTM3-209ENST00000565003 PILRAQ9UKJ1 303 aa9.85□□□□□ -0.83
CMTM3-209ENST00000565003 PACSIN2Q9UNF0 486 aaPredicted RBP9.85□□□□□ -0.83
CMTM3-209ENST00000565003 AAR2Q9Y312 384 aaKnown RBP9.85□□□□□ -0.83
CMTM3-209ENST00000565003 CFAP46Q8IYW2 2715 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 DDX3YO15523 660 aaKnown RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 RAD1O60671 282 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 POP7O75817 140 aaKnown RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 TJP3O95049 919 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 FTCDO95954 541 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 ITGB2P05107 769 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 LIFP15018 202 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 VCLP18206 1134 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 LPOP22079 712 aaPredicted RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 PBLDP30039 288 aaPredicted RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 AKT1P31749 480 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 CAPZBP47756 277 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 ZNF140P52738 457 aaPredicted RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 XIAPP98170 497 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 NFE2L1Q14494 772 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 SPARCL1Q14515 664 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 FNBP1LQ5T0N5 605 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 DENND5AQ6IQ26 1287 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 TMEM220Q6QAJ8 160 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 XKR5Q6UX68 686 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 MICALCLQ6ZW33 695 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 DET1Q7L5Y6 550 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 PEX26Q7Z412 305 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 ZNF605Q86T29 641 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 AMZ2Q86W34 360 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 IL22RA1Q8N6P7 574 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 EXD3Q8N9H8 876 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 ZNF398Q8TD17 642 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 CXorf40BQ96DE9 158 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 TGM7Q96PF1 710 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 TEFMQ96QE5 360 aaKnown RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 SLC12A9Q9BXP2 914 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 FBXO8Q9NRD0 319 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 PSMD13Q9UNM6 376 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 CAPN6Q9Y6Q1 641 aa9.84□□□□□ -0.83
CMTM3-209ENST00000565003 HELZ2Q9BYK8 2649 aaKnown RBP9.84□□□□□ -0.83
CMTM3-209ENST00000565003 TCRBV7S2A1N4TA0A589 114 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 C5orf60A6NFR6 353 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 C2orf81A6NN90 581 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 CCL22O00626 93 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 SGTAO43765 313 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 KIF1CO43896 1103 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 KCNJ13O60928 360 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 SRP72O76094 671 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 STK17BO94768 372 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 STK10O94804 968 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 FAM87AP0C7U9 286 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 AMD1P17707 334 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 SEPHS1P49903 392 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 GDF10P55107 478 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 PPP1CAP62136 330 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 SH3BP2P78314 561 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 KLF1Q13351 362 aaPredicted RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 PRPSAP1Q14558 356 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 RPE65Q16518 533 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 LONRF2Q1L5Z9 754 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 CEACAM20Q6UY09 585 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 TIPARPQ7Z3E1 657 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 RBM12BQ8IXT5 1001 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 KLHDC8BQ8IXV7 354 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 NLGN4XQ8N0W4 816 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 ZSCAN1Q8NBB4 408 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 NLGN4YQ8NFZ3 816 aaPredicted RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 OR13C4Q8NGS5 318 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 RNF31Q96EP0 1072 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 TBL1YQ9BQ87 522 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 FERMT1Q9BQL6 677 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 ZNF768Q9H5H4 540 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 ASB8Q9H765 288 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 ARNT2Q9HBZ2 717 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 AMFRQ9UKV5 643 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 R3HDM2Q9Y2K5 976 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 TMEM184BQ9Y519 407 aaPredicted RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 GCN1Q92616 2671 aaKnown RBP9.83□□□□□ -0.84
CMTM3-209ENST00000565003 PIEZO2Q9H5I5 2752 aa9.83□□□□□ -0.84
CMTM3-209ENST00000565003 LOC101059948A0A1B0GTJ6 334 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 AGAP14A8MT82 685 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 MIF4GDA9UHW6 222 aaKnown RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 POLR1CO15160 346 aaPredicted RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 TOX3O15405 576 aaPredicted RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 LDB2O43679 373 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 RASSF9O75901 435 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 METTL18O95568 372 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 CRTAMO95727 393 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 DLGAP3O95886 979 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 ZNF28P17035 718 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 MSH3P20585 1137 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 CDC25BP30305 580 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 CETN2P41208 172 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 HALP42357 657 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms