RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 OR51F1A6NGY5 319 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 NPIPB15A6NHN6 443 aaPredicted RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 C1QTNF3-AMACRE9PGA6 284 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PSMD11O00231 422 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 TAF4O00268 1085 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CCL22O00626 93 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 BCAT2O15382 392 aaPredicted RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 LEFTY1O75610 366 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SRP72O76094 671 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PRAMEF1O95521 474 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SEMA4FO95754 770 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PROS1P07225 676 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 RBP1P09455 135 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 LTA4HP09960 611 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CPA3P15088 417 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 FDXRP22570 491 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 GKP32189 559 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 VIPR1P32241 457 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SKIV2L2P42285 1042 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CLDN6P56747 220 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 TAS2R39P59534 338 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 DCDC1P59894 354 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PPP2CBP62714 309 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PPP2CAP67775 309 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CCDC15Q0P6D6 951 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 NFATC2Q13469 925 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PEX6Q13608 980 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 ITIH4Q14624 930 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SHBQ15464 509 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 HLA-BQ31612 363 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 FAM46CQ5VWP2 391 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 LRRC66Q68CR7 880 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SPATA21Q7Z572 469 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 PIGWQ7Z7B1 504 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 MMAAQ8IVH4 418 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 NAXDQ8IW45 347 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 KIRREL3Q8IZU9 778 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CHST14Q8NCH0 376 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CADM4Q8NFZ8 388 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 BAHD1Q8TBE0 780 aaPredicted RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 ZNF398Q8TD17 642 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SNX19Q92543 992 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 LPGAT1Q92604 370 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 KCNJ9Q92806 393 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 C7orf26Q96N11 449 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SLC6A18Q96N87 628 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 MRPL57Q9BQC6 102 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SIKE1Q9BRV8 207 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 AARSD1Q9BTE6 412 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 TSSK1BQ9BXA7 367 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 MRPL46Q9H2W6 279 aaKnown RBP9.64□□□□□ -0.87
UBFD1-203ENST00000564106 GAREM1Q9H706 876 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 DYRK4Q9NR20 520 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 TMEM216Q9P0N5 145 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CRLS1Q9UJA2 301 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 SARDHQ9UL12 918 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 ZMIZ1Q9ULJ6 1067 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 CRYL1Q9Y2S2 319 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 ARID1BQ8NFD5 2236 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 TRBV5-4A0A0C4DH59 114 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 WDR91A4D1P6 747 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 AGAP14A8MT82 685 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 E5RI56 91 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 H0Y8X5 98 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 PRMT5O14744 637 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 PHGDHO43175 533 aaKnown RBP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 SNX3O60493 162 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 RNASEH1O60930 286 aaKnown RBP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 FSBPO95073 299 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 TGDSO95455 350 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 CLDN7O95471 211 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 SERPINE1P05121 402 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 FTH1P19P0C7X4 201 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 MYL2P10916 166 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 PKMP14618 531 aaKnown RBP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 RPS3P23396 243 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 ITGB7P26010 798 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 DRD3P35462 400 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 SERPINB5P36952 375 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 ABCG1P45844 678 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 PSMD8P48556 350 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 ATP6V0D1P61421 351 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 XIAPP98170 497 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 PPARDQ03181 441 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 PTPRCAPQ14761 206 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 PCLAFQ15004 111 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 ACAP2Q15057 778 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 CDKN3Q16667 212 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 POM121L1PQ3SYA9 428 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 WDR45BQ5MNZ6 344 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 RBM20Q5T481 1227 aaKnown RBP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 LRRC8EQ6NSJ5 796 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 CRTC1Q6UUV9 634 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 DPPA4Q7L190 304 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 TAS2R42Q7RTR8 314 aa9.63□□□□□ -0.87
UBFD1-203ENST00000564106 RAB44Q7Z6P3 723 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-203ENST00000564106 CEP97Q8IW35 865 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms