RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ACOX2Q99424 681 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 SEPHS2Q99611 448 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 C1orf50Q9BV19 199 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 GORASP2Q9H8Y8 452 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 SLAMF8Q9P0V8 285 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 IFT80Q9P2H3 777 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 EIF2B4Q9UI10 523 aaKnown RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 CDC14AQ9UNH5 594 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 DHRS7Q9Y394 339 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ZNF711Q9Y462 761 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 PCDHB1Q9Y5F3 818 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ZFC3H1O60293 1989 aaKnown RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ANKRD66B4E2M5 251 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 NIPSNAP2O75323 286 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 KATNA1O75449 491 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ATE1O95260 518 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 F11P03951 625 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 COL6A1P12109 1028 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CASP2P42575 452 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 STT3AP46977 705 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 RGRP47804 291 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CTBSQ01459 385 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 MAD2L1Q13257 205 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 KCNA10Q16322 511 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ZNF829Q3KNS6 432 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 ZRANB3Q5FWF4 1079 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 GPR107Q5VW38 600 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 TTC23Q5W5X9 447 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 SLC2A7Q6PXP3 512 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CYP20A1Q6UW02 462 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 SCIMPQ6UWF3 145 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 Q6ZNX1 250 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CHST9Q7L1S5 443 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ADAMTSL2Q86TH1 951 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 OFCC1Q8IZS5 231 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ITFG1Q8TB96 612 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 GPR152Q8TDT2 470 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 BORCS5Q969J3 196 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 NRBF2Q96F24 287 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 AURKBQ96GD4 344 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 PPP3R2Q96LZ3 170 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 CEP295NLQ96MC4 621 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 NSMCE3Q96MG7 304 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 TRIM8Q9BZR9 551 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 NTN4Q9HB63 628 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 FAIMQ9NVQ4 179 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 FKBPLQ9UIM3 349 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 DNMT3LQ9UJW3 386 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 AGO1Q9UL18 857 aaKnown RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 RAI2Q9Y5P3 530 aa12.92□□□□□ -0.34
USB1-207ENST00000563149 ZFP37Q9Y6Q3 630 aaPredicted RBP12.92□□□□□ -0.34
USB1-207ENST00000563149 C16orf96A6NNT2 1141 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 H3BNC9 293 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 UPK1AO00322 258 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 LSM1O15116 133 aaKnown RBP12.91□□□□□ -0.34
USB1-207ENST00000563149 KCNH1O95259 989 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 CLIC3O95833 236 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 OTCP00480 354 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 S100BP04271 92 aaPredicted RBP12.91□□□□□ -0.34
USB1-207ENST00000563149 THRBP10828 461 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 MBL2P11226 248 aaPredicted RBP12.91□□□□□ -0.34
USB1-207ENST00000563149 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
USB1-207ENST00000563149 SLC6A4P31645 630 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 ATP5C1P36542 298 aaKnown RBP12.91□□□□□ -0.34
USB1-207ENST00000563149 CDKN1CP49918 316 aaPredicted RBP12.91□□□□□ -0.34
USB1-207ENST00000563149 ENTPD1P49961 510 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 KCNQ1P51787 676 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 TMED1Q13445 227 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 FBXO48Q5FWF7 155 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 BROXQ5VW32 411 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 FAM117BQ6P1L5 589 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 TBPL2Q6SJ96 375 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 IL27RAQ6UWB1 636 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 PIANPQ8IYJ0 282 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 CPNE9Q8IYJ1 553 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 CFAP52Q8N1V2 620 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 TTC30BQ8N4P2 665 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 LPCAT1Q8NF37 534 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 OR13F1Q8NGS4 319 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 MAGED4Q96JG8 741 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 ZBTB18Q99592 522 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 SPON2Q9BUD6 331 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 TTLL2Q9BWV7 592 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 P2RY12Q9H244 342 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 CCSER2Q9H7U1 834 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 TBC1D23Q9NUY8 699 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 DNAAF2Q9NVR5 837 aaKnown RBP12.91□□□□□ -0.34
USB1-207ENST00000563149 SRCAPQ6ZRS2 3230 aa12.91□□□□□ -0.34
USB1-207ENST00000563149 CROCCQ5TZA2 2017 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 GREB1Q4ZG55 1949 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 ANKRD28O15084 1053 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 ALPLP05186 524 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 CAPN1P07384 714 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 RHOCP08134 193 aa12.9□□□□□ -0.34
USB1-207ENST00000563149 CLCN7P51798 805 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms