RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 BLKP51451 505 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 PGGT1BP53609 377 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 ACTR1AP61163 376 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 SLC14A1Q13336 389 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 ITIH4Q14624 930 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 EFTUD2Q15029 972 aaKnown RBP eCLIP9.63□□□□□ -0.87
CLK3-208ENST00000562626 LONRF1Q17RB8 773 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 BCL7AQ4VC05 210 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 SPANXN3Q5MJ09 141 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 ZNF470Q6ECI4 717 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 ZNF549Q6P9A3 640 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 PACS1Q6VY07 963 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 TAF8Q7Z7C8 310 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 KCNMB4Q86W47 210 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 CILP2Q8IUL8 1156 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 SLC35F3Q8IY50 421 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 NAGSQ8N159 534 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 FSTL5Q8N475 847 aaPredicted RBP9.63□□□□□ -0.87
CLK3-208ENST00000562626 GPR150Q8NGU9 434 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 OR4C6Q8NH72 309 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 CERS2Q96G23 380 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 APOLD1Q96LR9 279 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 BIRC8Q96P09 236 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 RMI1Q9H9A7 625 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 PRDM8Q9NQV8 689 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 FAM114A2Q9NRY5 505 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 IARS2Q9NSE4 1012 aaKnown RBP9.63□□□□□ -0.87
CLK3-208ENST00000562626 KLC4Q9NSK0 619 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 TOR4AQ9NXH8 423 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 TAAR2Q9P1P5 351 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 GALPQ9UBC7 116 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 WDR37Q9Y2I8 494 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 MED16Q9Y2X0 877 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 PSAT1Q9Y617 370 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 CSNK1G3Q9Y6M4 447 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 NCOR2Q9Y618 2525 aa9.63□□□□□ -0.87
CLK3-208ENST00000562626 MDC1Q14676 2089 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 B4DGG1 531 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 KMOO15229 486 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 EIF3HO15372 352 aaKnown RBP eCLIP9.62□□□□□ -0.87
CLK3-208ENST00000562626 YKT6O15498 198 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 NIPSNAP2O75323 286 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 HAUS5O94927 633 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 SLU7O95391 586 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 ANXA6P08133 673 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 BRAFP15056 766 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 OGNP20774 298 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 GRK6P43250 576 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 EIF3BP55884 814 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 MAZP56270 477 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 CLDN6P56747 220 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 ARHGAP8P85298 464 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 TIAL1Q01085 375 aaKnown RBP eCLIP9.62□□□□□ -0.87
CLK3-208ENST00000562626 CAV1Q03135 178 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 GTF2H3Q13889 308 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 HLTFQ14527 1009 aaKnown RBP eCLIP9.62□□□□□ -0.87
CLK3-208ENST00000562626 ELOCQ15369 112 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 SEPT7Q16181 437 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 INSCQ1MX18 579 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 TEDDM1Q5T9Z0 273 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 ARMC3Q5W041 872 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 DUS1LQ6P1R4 473 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 CNSTQ6PJW8 725 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 CNTN4Q8IWV2 1026 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 OTUD6BQ8N6M0 293 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 FAM46DQ8NEK8 389 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 ACVR1CQ8NER5 493 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 GSDMBQ8TAX9 411 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 FAM136AQ96C01 138 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 LRRC39Q96DD0 335 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 CNDP2Q96KP4 475 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 SLC30A3Q99726 388 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 NRTNQ99748 197 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 TIMM29Q9BSF4 260 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 GSDMCQ9BYG8 508 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 LRRC4CQ9HCJ2 640 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 DLL3Q9NYJ7 618 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 NLGN3Q9NZ94 848 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 MOCS1Q9NZB8 636 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 NINJ2Q9NZG7 142 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 RABGEF1Q9UJ41 708 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 CDV3Q9UKY7 258 aaKnown RBP9.62□□□□□ -0.87
CLK3-208ENST00000562626 GPR34Q9UPC5 381 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 CRYL1Q9Y2S2 319 aa9.62□□□□□ -0.87
CLK3-208ENST00000562626 ANKRD11Q6UB99 2663 aaPredicted RBP9.61□□□□□ -0.87
CLK3-208ENST00000562626 ACACBO00763 2458 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 TCRBV9S1A1TA0A576 114 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 UBA6A0AVT1 1052 aaPredicted RBP9.61□□□□□ -0.87
CLK3-208ENST00000562626 GPR89AB7ZAQ6 455 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 TPP1O14773 563 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 SNX2O60749 519 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 TTC4O95801 387 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 GPR89BP0CG08 455 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
CLK3-208ENST00000562626 PAMP19021 973 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 RPL10P27635 214 aaKnown RBP9.61□□□□□ -0.87
CLK3-208ENST00000562626 PDHA2P29803 388 aa9.61□□□□□ -0.87
CLK3-208ENST00000562626 FMO4P31512 558 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms