RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TMED10P49755 219 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 DGKQP52824 942 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 TBX4P57082 545 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 ZNF235Q14590 738 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 CBX2Q14781 532 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 ZNF846Q147U1 533 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 HS3ST5Q8IZT8 346 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 THEM5Q8N1Q8 247 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 TTC16Q8NEE8 873 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 CDKN2AIPNLQ96HQ2 116 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 CGREF1Q99674 301 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 POLR1EQ9GZS1 481 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 LIMD1Q9UGP4 676 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 EIF2B4Q9UI10 523 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 DICER1Q9UPY3 1922 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 MRPL19P49406 292 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 NRG1Q02297 640 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 PPP1R8Q12972 351 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 AQP6Q13520 282 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 LAPTM5Q13571 262 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 MAPRE1Q15691 268 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 MS4A13Q5J8X5 152 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 SDHAF4Q5VUM1 108 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 DLEU7Q6UYE1 221 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 BTLAQ7Z6A9 289 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 CIR1Q86X95 450 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 FAM86B1Q8N7N1 296 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 CHDHQ8NE62 594 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 ISG20Q96AZ6 181 aaKnown RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 ERLEC1Q96DZ1 483 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 SH3YL1Q96HL8 342 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 UGT2B28Q9BY64 529 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 SLC27A5Q9Y2P5 690 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 STX16O14662 325 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 RAMP2O60895 175 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 CTSHP09668 335 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 GGT1P19440 569 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 HTR1BP28222 390 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 KCNC4Q03721 635 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 FXNQ16595 210 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 PLA2G4EQ3MJ16 856 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 TXNDC11Q6PKC3 985 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 SPESP1Q6UW49 350 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 ENPP6Q6UWR7 440 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 HMG20AQ9NP66 347 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 PRDM5Q9NQX1 630 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 ATAD3AQ9NVI7 634 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 TLR6Q9Y2C9 796 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 FNDC3AQ9Y2H6 1198 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 ST14Q9Y5Y6 855 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 TTC3P53804 2025 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 KRBA1A5PL33 1030 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 TOR1BO14657 336 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 PRSS23O95084 383 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 HPRP00739 348 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 OR4Q2P0C623 313 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 G6PDP11413 515 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 AGXTP21549 392 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 PIGAP37287 484 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 OXCT1P55809 520 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 NR6A1Q15406 480 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 PTPRNQ16849 979 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 SETMARQ53H47 684 aaPredicted RBP13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 RAP1GAP2Q684P5 730 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 IL27RAQ6UWB1 636 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 GPSM1Q86YR5 675 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 NKAPQ8N5F7 415 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 DPP10Q8N608 796 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 METTL6Q8TCB7 284 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 THUMPD3Q9BV44 507 aaKnown RBP13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 CPQQ9Y646 472 aa13.8□□□□□ -0.2
VPS9D1-202ENST00000561976 TMEM247A6NEH6 219 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 TNFRSF10BO14763 440 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 HS6ST1O60243 411 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 HTR1AP08908 422 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 CD300CQ08708 224 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 CD47Q08722 323 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 EFEMP1Q12805 493 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 EPS8Q12929 822 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 TRIM32Q13049 653 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 KCNAB2Q13303 367 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 GRB14Q14449 540 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 AAK1Q2M2I8 961 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 TYSND1Q2T9J0 566 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 CTU2Q2VPK5 515 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ANKRD34AQ69YU3 496 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 Q6ZSR9 355 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 OR2T12Q8NG77 320 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 OR52B6Q8NGF0 335 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 PEX13Q92968 403 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ITPKCQ96DU7 683 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 PKMYT1Q99640 499 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 AMBRA1Q9C0C7 1298 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 EXD2Q9NVH0 621 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms