RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 EPB41L5Q9HCM4 733 aa19.56■□□□□ 0.72
TSPAN3-210ENST00000561277 WDR37Q9Y2I8 494 aa19.56■□□□□ 0.72
TSPAN3-210ENST00000561277 DNMT3AQ9Y6K1 912 aaPredicted RBP19.56■□□□□ 0.72
TSPAN3-210ENST00000561277 AGRPO00253 132 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 KCNJ13O60928 360 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 MPOP05164 745 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 NMBRP28336 390 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 CASQ1P31415 396 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 HALP42357 657 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 DMPKQ09013 629 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 ST3GAL2Q16842 350 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 C3orf38Q5JPI3 329 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 CASC4Q6P4E1 433 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 ABRAXAS1Q6UWZ7 409 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 SYT10Q6XYQ8 523 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 TMPRSS9Q7Z410 1059 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 MPP5Q8N3R9 675 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 OR4L1Q8NH43 312 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 PEX13Q92968 403 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 NUDT22Q9BRQ3 303 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 NRSN2Q9GZP1 204 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 ZNF624Q9P2J8 865 aaPredicted RBP19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 PCYOX1Q9UHG3 505 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 CELSR3Q9NYQ7 3312 aa19.55■□□□□ 0.72
TSPAN3-210ENST00000561277 UNC13CQ8NB66 2214 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 IGHV1OR21-1A0A087WYE8 117 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 TMEM8BA6NDV4 472 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 MGAT4DA6NG13 374 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 CPNE6O95741 557 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 VIPP01282 170 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 CD1CP29017 333 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 SLC19A1P41440 591 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 MAPK9P45984 424 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 INHBCP55103 352 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 ETF1P62495 437 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 UBE2IP63279 158 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 AGAP9Q5VTM2 703 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 CES3Q6UWW8 571 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 PIM3Q86V86 326 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 CAND1Q86VP6 1230 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 OR2L2Q8NH16 312 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 CXorf40BQ96DE9 158 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 AHCYL2Q96HN2 611 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 TREX1Q9NSU2 369 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 SATB2Q9UPW6 733 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 DMXL2Q8TDJ6 3036 aa19.54■□□□□ 0.72
TSPAN3-210ENST00000561277 GABREP78334 506 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 PTK6Q13882 451 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 ITIH4Q14624 930 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 CLCA4Q14CN2 919 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 RTP5Q14D33 572 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 FASTKD1Q53R41 847 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 FOXR1Q6PIV2 292 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 WASH2PQ6VEQ5 465 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 PPIL6Q8IXY8 311 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 LILRA3Q8N6C8 439 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 AVL9Q8NBF6 648 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 SLCO2A1Q92959 643 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 SH3KBP1Q96B97 665 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 MFSD3Q96ES6 412 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 LINC00615Q96LM1 132 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 TMEM74Q96NL1 305 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 SERPINB12Q96P63 405 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 WASH6PQ9NQA3 447 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 POT1Q9NUX5 634 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 PRAMEF33A0A0G2JMD5 474 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 XRCC1P18887 633 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 CSF2RBP32927 897 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 NSG1P42857 185 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 PTGIRP43119 386 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 DR1Q01658 176 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 SEMA3AQ14563 771 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 PHF19Q5T6S3 580 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 RNASEH2BQ5TBB1 312 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 METRNLQ641Q3 311 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 LDB1Q86U70 411 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 CFAP206Q8IYR0 622 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 NAT8LQ8N9F0 302 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 KDF1Q8NAX2 398 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 MCUQ8NE86 351 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 OR10G6Q8NH81 332 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 HM13Q8TCT9 377 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 TTC1Q99614 292 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 TRIM56Q9BRZ2 755 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 KIFC1Q9BW19 673 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 TBC1D10AQ9BXI6 508 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 WWP1Q9H0M0 922 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 SEMA6CQ9H3T2 930 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 VPS37BQ9H9H4 285 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 XAB2Q9HCS7 855 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 CATSPERZQ9NTU4 200 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 IMP3Q9NV31 184 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 SAMD15Q9P1V8 674 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 RNF14Q9UBS8 474 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 ANAPC5Q9UJX4 755 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 ZMIZ1Q9ULJ6 1067 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 SOX13Q9UN79 622 aa19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 CFAP20Q9Y6A4 193 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-210ENST00000561277 PRSS21Q9Y6M0 314 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms