RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.17	□□□□□ -1.9
SLTM-223	ENST00000560532	ZHX2	Q9Y6X8	837 aa		3.17	□□□□□ -1.9
SLTM-223	ENST00000560532	PRAG1	Q86YV5	1406 aa		3.17	□□□□□ -1.9
SLTM-223	ENST00000560532		A0A087X0M5	115 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532		A0A1B0GX30	115 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	EIF4E1B	A6NMX2	242 aa	Known RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532		F5H0A9	414 aa	Predicted RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	MAP2K7	O14733	419 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	ARHGEF9	O43307	516 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	KCNK5	O95279	499 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	SELL	P14151	372 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	CHM	P24386	653 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	HOXC8	P31273	242 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	MAN1A1	P33908	653 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	MAP2K2	P36507	400 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	TFAP4	Q01664	338 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	SPOCK1	Q08629	439 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	CDC16	Q13042	620 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	PDE1C	Q14123	709 aa	Predicted RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	PCGF3	Q3KNV8	242 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	TECRL	Q5HYJ1	363 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	SNX30	Q5VWJ9	437 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	PLEKHM3	Q6ZWE6	761 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	PM20D2	Q8IYS1	436 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	RASGEF1C	Q8N431	466 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	HJURP	Q8NCD3	748 aa	Predicted RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	UTP15	Q8TED0	518 aa	Known RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	PHF21A	Q96BD5	680 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	NEUROD6	Q96NK8	337 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	GFI1	Q99684	422 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	TMEM39B	Q9GZU3	492 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	LRMDA	Q9H2I8	198 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	BICC1	Q9H694	974 aa	Known RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	EPB41L5	Q9HCM4	733 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	ZDHHC18	Q9NUE0	388 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	IRAK4	Q9NWZ3	460 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	TRMT1	Q9NXH9	659 aa	Known RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	ORC3	Q9UBD5	711 aa	Predicted RBP	3.16	□□□□□ -1.9
SLTM-223	ENST00000560532	AASS	Q9UDR5	926 aa		3.16	□□□□□ -1.9
SLTM-223	ENST00000560532		A0A087X002	238 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	TMEM178B	H3BS89	294 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	SH2B2	O14492	632 aa	Predicted RBP	3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	SMAD9	O15198	467 aa	Known RBP	3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	CTSV	O60911	334 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	SRSF10	O75494	262 aa	Known RBP	3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	PDE9A	O76083	593 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	MBD4	O95243	580 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	OR2C1	O95371	312 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	CSF2RA	P15509	400 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	DPEP1	P16444	411 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	ITGA9	Q13797	1035 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	NAB2	Q15742	525 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	ASTE1	Q2TB18	679 aa	Predicted RBP	3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	SARM1	Q6SZW1	724 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	CFAP77	Q6ZQR2	320 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	GCSAM	Q8N6F7	178 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	AMER3	Q8N944	861 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	RBM15B	Q8NDT2	890 aa	Known RBP	3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	OR8K5	Q8NH50	307 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	ZKSCAN4	Q969J2	545 aa	Predicted RBP	3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	MPP4	Q96JB8	637 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	POM121L2	Q96KW2	1035 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	ITPA	Q9BY32	194 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	FGF22	Q9HCT0	170 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	RRP7BP	Q9NSQ0	103 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	DIAPH3	Q9NSV4	1193 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	OLA1	Q9NTK5	396 aa	Known RBP	3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	SETD4	Q9NVD3	440 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	CACNG5	Q9UF02	275 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	RASAL2	Q9UJF2	1139 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	TP53TG3	Q9ULZ0	132 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	SMCHD1	A6NHR9	2005 aa		3.15	□□□□□ -1.91
SLTM-223	ENST00000560532	RUSC2	Q8N2Y8	1516 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532		A0A0G2JNG1	304 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	ANKRD66	B4E2M5	251 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532		H7C423	109 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	EPB41L2	O43491	1005 aa	Known RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	PLPP2	O43688	288 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	BUD23	O43709	281 aa	Known RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	USO1	O60763	962 aa	Known RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	RNASEH2A	O75792	299 aa	Known RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	SCGB1D1	O95968	90 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	HIST1H2AB	P04908	130 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	HIST1H2AD	P20671	130 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	HRH2	P25021	359 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	NFKBIA	P25963	317 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	TM4SF1	P30408	202 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	HOXA13	P31271	388 aa	Predicted RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	PIK3CA	P42336	1068 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	CTSC	P53634	463 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	GALC	P54803	685 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	MRPS5	P82675	430 aa	Known RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	EIF4A2	Q14240	407 aa	Known RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	MVP	Q14764	893 aa	Known RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	KIR2DS5	Q14953	304 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	XKR6	Q5GH73	641 aa		3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	GKAP1	Q5VSY0	366 aa	Predicted RBP	3.14	□□□□□ -1.91
SLTM-223	ENST00000560532	PLXDC2	Q6UX71	529 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms