RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 COL28A1Q2UY09 1125 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 C15orf32Q32M92 178 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 HIGD2BQ4VC39 106 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 SVIPQ8NHG7 77 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 POF1BQ8WVV4 589 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 SMPDL3BQ92485 455 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 RRNAD1Q96FB5 475 aaKnown RBP2.18□□□□□ -2.06
SPG11-222ENST00000560435 CCDC136Q96JN2 1154 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 USP28Q96RU2 1077 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 PCGF6Q9BYE7 350 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 OR14J1Q9UGF5 321 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 YIPF1Q9Y548 306 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 MYH15Q9Y2K3 1946 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 IGLV9-49A0A0B4J1Y8 123 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 TEX13DA0A0J9YY54 714 aaPredicted RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 TTC36A6NLP5 189 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 OR6C76A6NM76 312 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 F5H423 210 aaPredicted RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 PHOX2AO14813 284 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 COX7A2P14406 83 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 NKX2-1P43699 371 aaPredicted RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 THOP1P52888 689 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 CDR2Q01850 454 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 TDGQ13569 410 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 PDE1CQ14123 709 aaPredicted RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 ALG11Q2TAA5 492 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 HLA-BQ31612 363 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 WLSQ5T9L3 541 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 CYP4A22Q5TCH4 519 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 KHDRBS2Q5VWX1 349 aaKnown RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 SLC22A25Q6T423 547 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 CCDC13Q8IYE1 715 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 DCLK2Q8N568 766 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 SLC5A8Q8N695 610 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 C1orf52Q8N6N3 182 aaKnown RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 ZNF383Q8NA42 475 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 SLC38A9Q8NBW4 561 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 SUSD6Q92537 303 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 KLHL15Q96M94 604 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 SMC6Q96SB8 1091 aa2.17□□□□□ -2.06
SPG11-222ENST00000560435 PUS3Q9BZE2 481 aaKnown RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 EXO1Q9UQ84 846 aaKnown RBP2.17□□□□□ -2.06
SPG11-222ENST00000560435 EIF4E1BA6NMX2 242 aaKnown RBP2.16□□□□□ -2.06
SPG11-222ENST00000560435 SRRM5B3KS81 715 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 C22orf31O95567 290 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 MAGEA11P43364 429 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 GSDMDP57764 484 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 UFM1P61960 85 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 NFIL3Q16649 462 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 MAP3K21Q5TCX8 1036 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 C1orf228Q6PIY5 440 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 GPALPP1Q8IXQ4 340 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 HACE1Q8IYU2 909 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 GCSAMQ8N6F7 178 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 OR1J2Q8NGS2 313 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 HPSE2Q8WWQ2 592 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 SEMA4DQ92854 862 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 FUCA2Q9BTY2 467 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 MAGIXQ9H6Y5 334 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 SLC28A3Q9HAS3 691 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 SLC6A13Q9NSD5 602 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 INTS9Q9NV88 658 aaKnown RBP2.16□□□□□ -2.06
SPG11-222ENST00000560435 TAB2Q9NYJ8 693 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 UBA2Q9UBT2 640 aaPredicted RBP2.16□□□□□ -2.06
SPG11-222ENST00000560435 SLC25A10Q9UBX3 287 aaPredicted RBP2.16□□□□□ -2.06
SPG11-222ENST00000560435 MUTYHQ9UIF7 546 aa2.16□□□□□ -2.06
SPG11-222ENST00000560435 CNOT7Q9UIV1 285 aaKnown RBP2.16□□□□□ -2.06
SPG11-222ENST00000560435 DNM1LO00429 736 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 LDLRAD4O15165 306 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 IDH3BO43837 385 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 SLC12A1Q13621 1099 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 FASTKD3Q14CZ7 662 aaKnown RBP2.15□□□□□ -2.07
SPG11-222ENST00000560435 ATG16L1Q676U5 607 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 CCDC174Q6PII3 467 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 FIP1L1Q6UN15 594 aaKnown RBP2.15□□□□□ -2.07
SPG11-222ENST00000560435 BBS12Q6ZW61 710 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 EMC1Q8N766 993 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 GAL3ST4Q96RP7 486 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 SEMA3CQ99985 751 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 PLCB1Q9NQ66 1216 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 ASAH2Q9NR71 780 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 ANAPC11Q9NYG5 84 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 THEGQ9P2T0 379 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 SLC7A7Q9UM01 511 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 TMEM184BQ9Y519 407 aaPredicted RBP2.15□□□□□ -2.07
SPG11-222ENST00000560435 HCFC1P51610 2035 aa2.15□□□□□ -2.07
SPG11-222ENST00000560435 LRRC53A6NM62 1247 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 KLF11O14901 512 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 ATP6V0E1O15342 81 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 ZNF182P17025 639 aaPredicted RBP2.14□□□□□ -2.07
SPG11-222ENST00000560435 CKMT2P17540 419 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 PIK3R1P27986 724 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 PSMC2P35998 433 aaKnown RBP2.14□□□□□ -2.07
SPG11-222ENST00000560435 PGM1P36871 562 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 CDH11P55287 796 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 TRIM14Q14142 442 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 E2F5Q15329 346 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 NSUN5P2Q63ZY6 315 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms